Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02096 ATGGCTGTGTCTTCTACCACTGCCCCAGTATGTCTTCCTGCTAAAAACATTCCAAACCCTCAGCTCCAAAAACTTGGTTTCTCAAGCACCGTTTCCTTTACTGTGAAACAGCGGAGATCGTTACGCATCAGAAGCTCCTCGGCTGAGACCTCTGACACAGGCGTAGATTCAGAGAGTTCCATTGAACTTCCCAAGGAACCCTATTCATTAATTTCAGCTCTTAACGTCGAAAGGATTCTCCGTGGCTTACCAATTACAGATGCAGATCATTATGGTAGGCTAGGTGTTCCACGAGGATGTCCCTTTGACATGGTGGGGGTTGCCTATAAGAACAAGATTCAAGAATTGAAGACTCAGAATCTAGAGGAGGAGGAACTTGAGAAGAAATTGGAACTTCTCAAAGAATCATACATCATCCTGTCCTCAGAAGAAGAAAGAAGAATCTATGACTGGAGTTTGGCCAGAGTAAACAACACCGAAACATTCATTTGGCCGTTCGAGGTTGACATAACACAGACAAAAATCCCAGATGAAGATCCTCCACAACTGGAGAAAGATGTACCTCCTAATCGTCTAGCGGGTCGAATAGCGGGTGGATTTTTTTTTGTCGGGTCGGGTTGCGGAGAGAATATTAATATTTTTTGA 645 0.4403 MAVSSTTAPVCLPAKNIPNPQLQKLGFSSTVSFTVKQRRSLRIRSSSAETSDTGVDSESSIELPKEPYSLISALNVERILRGLPITDADHYGRLGVPRGCPFDMVGVAYKNKIQELKTQNLEEEELEKKLELLKESYIILSSEEERRIYDWSLARVNNTETFIWPFEVDITQTKIPDEDPPQLEKDVPPNRLAGRIAGGFFFVGSGCGENINIF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02096 214 Gene3D DnaJ domain 80 163 IPR036869 -
Vian4g02096 214 Coils Coil 109 143 - -
Vian4g02096 214 SUPERFAMILY Chaperone J-domain 88 155 IPR036869 -
Vian4g02096 214 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 201 IPR044199 GO:0009535|GO:0010598
Vian4g02096 214 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 71 162 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02096 K23052 - gmx:100782990 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02096 4 37804074 37807556 Vian4g02096 4 37804074 37807556 ECH