Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02066 ATGGAGACAGGCAGCCTCTGTGTCTCTGTAGCGACGATTAAAGTGGATTGTTTGCCAATGGAATGTAATTATCAGTGTGGCCAAAGTGTTGTGAGCTTGAAGAGAAAGTCCCCAGAAGATGAAAATCGTGTACTCTTCAACACCTTTTCTCTGGATGACCTTAATGAAGATCTCTTTGAAAGGATACTTTCATGGCTTCCAACTTCCACATTCTTTCGCCTAAGTTCTGTGTGCAAAAGATGGAAATCGGTTGCTGATTCTGCCAGTTTCAAGCTTGCCTGCTCTCACATTCCCTCGAGGGATCCTTGGTTTTTAATGGTTGCTCCCAACCTTAATCAATCTGTTATCTTTGATTCTGCTGAGAGCGCTTGGAAGAGACTAAACCACCCACCTCTTCTGCAAGAGGAATCTAACCAACACTGCATGCCGGTTGCAGCCTCTGGCGGCTTGATTTGCCACCGGAAATTATCAGGAAATTTCATTGTGAGCAACCCCGTGACAGGATCTTGTACAGAACTTCCCCCACTTCACGCCCCGCAGCATCAACCTCTCAATGCCATTGTGATGAGCACAGCTTGCAAAGACCAACTCTCCTTCAAAATTGTCTTAGTCTTTGGTGAACTTCCAAATCTCTTGTTCAAAGTCTACGATTCAAGATCTGACTGTTGGGATGATGATATTGCTTTGAGGAGAAAGACAGAAGACAGTTCAATGGAACATGATTCTACTGATGACAATGTTGTGTACTTCCTCAGCAAGGCTGGAATTGTTGTGGCAAGCAACATGCAGAGAAGCCCCTCTAAGCAATATTCATCAGTTATTACCAACAAAGATGGCCAAGACATAGTGTATTTTCTTAGCTCCTCAGGGAAAGTGGTAGCATGCAATTTAACGTGCAAGTGCTTCTCTGAGTACCCCAGGTTGTTACCTGTTTTTAGTGAGTATTCCATTGATGTTGTAGAGTGCAATGGGGAGATGCTAGTTGTTTTGTTATCAGAATTCTTGGAGACTGCAACTCTTAGAGTATGGAAATATGACGAGGCTAACAGAGGGTGGCACCAGATCGCGGCAATGCCTGCAGCAGATTCTCATGAGTGGTATGGAAAGAAAGCAGACATCAATTGTGTTGGAGCTGGAAACCAAATATTGATATGCTTGAATTCCCCTGATCTATGCACTTATATTCTGTGTGATTTGGAAACCAACAAGTGGGTTCAATTGCCAAAATGTTGCATAAATGGAGAACTCATAGACTTTATGTCTGCCTTTTCATTCGAGCCTCGAATAGAGGCTTCTGTATGA 1302 0.4339 METGSLCVSVATIKVDCLPMECNYQCGQSVVSLKRKSPEDENRVLFNTFSLDDLNEDLFERILSWLPTSTFFRLSSVCKRWKSVADSASFKLACSHIPSRDPWFLMVAPNLNQSVIFDSAESAWKRLNHPPLLQEESNQHCMPVAASGGLICHRKLSGNFIVSNPVTGSCTELPPLHAPQHQPLNAIVMSTACKDQLSFKIVLVFGELPNLLFKVYDSRSDCWDDDIALRRKTEDSSMEHDSTDDNVVYFLSKAGIVVASNMQRSPSKQYSSVITNKDGQDIVYFLSSSGKVVACNLTCKCFSEYPRLLPVFSEYSIDVVECNGEMLVVLLSEFLETATLRVWKYDEANRGWHQIAAMPAADSHEWYGKKADINCVGAGNQILICLNSPDLCTYILCDLETNKWVQLPKCCINGELIDFMSAFSFEPRIEASV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02066 433 Pfam F-box domain 51 90 IPR001810 GO:0005515
Vian4g02066 433 PANTHER BNACNNG10540D PROTEIN 48 432 - -
Vian4g02066 433 Gene3D - 105 415 IPR015915 GO:0005515
Vian4g02066 433 CDD F-box_AtFBW1-like 52 90 - -
Vian4g02066 433 Gene3D - 45 91 - -
Vian4g02066 433 SUPERFAMILY F-box domain 48 106 IPR036047 GO:0005515
Vian4g02066 433 ProSiteProfiles F-box domain profile. 48 93 IPR001810 GO:0005515
Vian4g02066 433 SMART fbox_2 54 94 IPR001810 GO:0005515
Vian4g02066 433 SUPERFAMILY Galactose oxidase, central domain 114 411 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02066 Vian-Chr4 37495569 37498284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02066 - - gmx:100786481 733.791