Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02058 ATGCTTGCCGTTGGATTGCCCTTCCTCGTCATGCTTGCTGCACCGAAAGTCGTGAGTGTATATTCAACTGGTTTCACCAGTGTGCATGGCGAAACGCCCTCTGCTGAGTATGCGAGGATGAGGAGGGAATCGCTTGAAAGTAAATTTGGGCATGCTCTTGGAACTTATAGTTCGAAGAGTTTCAATGCTATCTACCGGTTTGGCCCCTTTTTGGCTTTGTACAGGGCAGCAATTATTTCATTTCATGTGTTAAGGCTAGCCATGTGGCAATTATTCGTTCAAGACATGAAAAAACGTGCTGTTAAGCTTGGGCAGGCATTGAGCACTCGGCCTGACATATTACCAACAATATATTGCCAAGAACTTGCCAAGTTACAGGATCAAATACCTCCGTTTCCAACTGACGTTGCAATCAAATCTATTGAGAGTCAGTTTGGTGTTCCTATTGATGAAATTTTTAATGACATCACCCCGTCACCTATTGCAGCAGCATCCTTGGGGCAAGTATATAAAGCTCACCTGCATTCTGGAGAGCTGGTTGCCGTAAAGGTACAGAGGCCCGGTATGTCTCTTTCATTGACTCTTGATGCTTTGCTATTCCATATGATAGGGGGCCAATTAAAACGGTTTGCCAAGGCCCGGAGAGATCTTTTTGTGGCAGTAAATGAAATGGTCAGGCACATGTTTGATGAAATTGATTATGTCCTGGAGGGAAAAAATGCTGAGCGCTTTGCTACTCTCTACTGTTGGTCTTCTGGAGGTAATGAGCAGAGCAGCAAATTTGCAGATGGGATTAAACACAAGAGAACAAATGCTGTCAAAGCTCCAAAAATATATTGGGACTACACATGCTCCACTGTGCTGACTATGGAGTGGATAGATGGAATTAAGCTTACAGATGAAACAGGCTTGACTGAAGCTTCTTTGAACAGAAGGAAGCTCATTGACCAGGGATTGTACTGCTCTTTGAGGCAAATGCTTGAGGTTGGTTTTTTCCATGCCGATCCTCATCCAGGAAATCTTGTTGCGATAAATGATGGATCAATTGCATATTTCGACTTTGGAATGATGGGGGATATTCCTAGGCATTATCGAATTGGACTTATTCAAATGATTGTGCACTTTGTTAATCGTGACTCTCTAAGCTTGGCAAATGACTTCCTGTCTTTGGGATTTATTCCTGAAGGGGTTGATGTACATTCAGTTTCTGATGCGCTGAAAACGTCATTCGCTGATCAGACTGGTGAATCTCAAGATTTTCAGGGAATTATGAACCAACTATATGACGTCATGTATGAATTTAATTTCTCCCTCCCGCCAGATTATGCTCTTGTGATAAGAGCATTGGGATCGCTAGAAGGCACAGCTAAAGTTTTGGATCCCGACTTTAAAGTCATTGAGAGTGCATATCCTTTTGTCATTGGGAGACTTATAGCAGACCCAAACCCTGATATGAGAAGAATTTTGAGGGAACTTCTCATTCGTAACAATGGATCCATAAGGTGGAACCGGCTAGAACGCCTGGTAGCAGCAATATCTGAACAAGCTTCTGAGATAACTGGAGACCCTAGTTCTGAAAAGTTTTCTAGTTCTTCTGTTTGGAAGTTATTTGACATGCACGCTGTTGTTGATTCCACTGAAGATCTTTTATTATTCATATTATCAGACAAGGGTCTTAGAGTGCGTTTTTTCCTTCTTCGGGATATAATAGAAGCAGCTGATGTGTTTCTGCAAAATGAAGTGATTGATTGCGCATTAGATGAGAATCCTCAAGGGCAGAGAACATTACTATTTGAGGAGCGTGATATCCTGGGTAGGATTGGAAAAGGGTTTGATTACCTTTGTGAAGTAGTGAAGTTGGCGCCAGCGGAGTGGACAGCAATGGTTATTCGGATGTCCGTTAGGCCCGAGGTTCACAGATTTGCTTTAGATATTATTTCAGCTATAGCTTTGCATTCTAGCTACAAATTACAGCATAAACATTCCATTCTTTACCTCTACATGCTTCCCAAAATTTACTTTCATATTTTTCAGCAGTCTTTAACTAAATATCATAAAATCGTAAGGTAA 2070 0.4174 MLAVGLPFLVMLAAPKVVSVYSTGFTSVHGETPSAEYARMRRESLESKFGHALGTYSSKSFNAIYRFGPFLALYRAAIISFHVLRLAMWQLFVQDMKKRAVKLGQALSTRPDILPTIYCQELAKLQDQIPPFPTDVAIKSIESQFGVPIDEIFNDITPSPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQLKRFAKARRDLFVAVNEMVRHMFDEIDYVLEGKNAERFATLYCWSSGGNEQSSKFADGIKHKRTNAVKAPKIYWDYTCSTVLTMEWIDGIKLTDETGLTEASLNRRKLIDQGLYCSLRQMLEVGFFHADPHPGNLVAINDGSIAYFDFGMMGDIPRHYRIGLIQMIVHFVNRDSLSLANDFLSLGFIPEGVDVHSVSDALKTSFADQTGESQDFQGIMNQLYDVMYEFNFSLPPDYALVIRALGSLEGTAKVLDPDFKVIESAYPFVIGRLIADPNPDMRRILRELLIRNNGSIRWNRLERLVAAISEQASEITGDPSSEKFSSSSVWKLFDMHAVVDSTEDLLLFILSDKGLRVRFFLLRDIIEAADVFLQNEVIDCALDENPQGQRTLLFEERDILGRIGKGFDYLCEVVKLAPAEWTAMVIRMSVRPEVHRFALDIISAIALHSSYKLQHKHSILYLYMLPKIYFHIFQQSLTKYHKIVR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02058 689 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 45 655 - -
Vian4g02058 689 Pfam ABC1 atypical kinase-like domain 124 384 IPR004147 -
Vian4g02058 689 CDD ABC1_ADCK3-like 124 387 - -
Vian4g02058 689 SUPERFAMILY Protein kinase-like (PK-like) 126 376 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02058 Vian-Chr4 37379522 37387747 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02058 K08869 - gmx:100811652 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02058 4 37379522 37387747 Vian4g02058 4 37379522 37387747 ECH