Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02045 ATGGATGTGAATCAACCAGGATCAAGATCCAGGGTCCTTGTTTGTGCATCAGCATCATCTTCTTCTCGCTGTAAAGCATGGTTAGTGCAATCCATTCCCACCAATATGCCCCACCTACACCATATTCCTGGCACCCTCTCTACTGGGGATGTGCTTCGGTGGCTGGCTGCAAACTCCACCACGAGGCTTCACATAATTGCTCAATATTGGCAGCTTCTACCTTCCCCCAACGATCCTCGATCTGGGGACTATGGTTACACTCAACGTCAGATGCATGAATTTGGTGCCAGTGAAGGTGTTTCTCTTTATCAAGAATTAGATGCTACTGCTGAGCGGAATGTTAGCATCCGGTTACTGTCCCACTCTGGAGTATATCCAACTTTTACCTCAGAACCATCCAAACTTGCTGTCGGAAGGCCAAATGTCGAAAATGTGACATTGCTGCTGGAGGATTGGTGGGGCTCCGGCATTGTTCATGCCAAAGTTTGGATATCTGATAGTAGGGATGTGTATATTGGATCTGCAAACAATGACTGGAAATCTCTCACACAGGTCAAAGAACTTGGAATTTACTTTACTGATTGTCCTGAAATAGCTGAAAAGGTCGAGCTGTACTTTGACAATTTGTGGACACTAGCATCCCTCGATTCTTCAGCTTACACGAAAACAGTGTTTGATCAAGAGTGGCAAGTGGAGAGGAAGTTTCCTTGCTGGTCACATTTCATTGATCATAAAGAGAGATGCAAGTCACCTCTTCCTCGATATCTGAAGACTCCTCATGTTGCAGGATATCCTATTCTGTCTGACCCTTACATGTTTGTGATTTCATTTCAAACCCCTGGGACTAACTATTCAACAAAGCTCCCCCAAGTCAGCTATCTATCCTTTGCACCCCAAGAGCTATTATTTGGCAAATATCAAGCTGATGAGCAGGCATGGATTGATACAATCAAGTCTGTTGGAGATAAGCAGGCAGTAAGAATCAGTACAATGGACTGGTTAGGTCAGTCACAATTTATGGACCAAACAATTTACTGGTCATCCTTATCATCTGCAATATCAGAGGTGGTGTTTTCGAAGAATGCAACAGTACAGCTACTGGTGGCATATTGGGCACACTCCATCAGTAACACAGATGTGTACCTCAAGTCTCTTCTCTACACCAACAACCTCTGCTCTTCCTCAAAGTACAACAAATGCTCTGGGAAAGTTGAGATAAAATACTATGTGGTTCCTGATTTCAACATGACAGGACCTGCTATTCATGGAGGAACTAAAACAGGAAACAAATACCCTGATTTTACAAGAGTGAATCATGGAAAATATGCAGTTAGTGATGTAAGGGCACACATTGGGACTAGCAACCTTGTATGGGACTACTTCTACACAACGGCAGGTGTCAGCTTTGGGACAAACAACACTGCCATCATCTCTAAACTTGGGGAAATTTTCAATGCTGATTGGAACTCACCCTATGCTGTTCCATTAGAAGAGCTGGAGAAAGGTCACAAAAGGTCAATTTAA 1524 0.4357 MDVNQPGSRSRVLVCASASSSSRCKAWLVQSIPTNMPHLHHIPGTLSTGDVLRWLAANSTTRLHIIAQYWQLLPSPNDPRSGDYGYTQRQMHEFGASEGVSLYQELDATAERNVSIRLLSHSGVYPTFTSEPSKLAVGRPNVENVTLLLEDWWGSGIVHAKVWISDSRDVYIGSANNDWKSLTQVKELGIYFTDCPEIAEKVELYFDNLWTLASLDSSAYTKTVFDQEWQVERKFPCWSHFIDHKERCKSPLPRYLKTPHVAGYPILSDPYMFVISFQTPGTNYSTKLPQVSYLSFAPQELLFGKYQADEQAWIDTIKSVGDKQAVRISTMDWLGQSQFMDQTIYWSSLSSAISEVVFSKNATVQLLVAYWAHSISNTDVYLKSLLYTNNLCSSSKYNKCSGKVEIKYYVVPDFNMTGPAIHGGTKTGNKYPDFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGVSFGTNNTAIISKLGEIFNADWNSPYAVPLEELEKGHKRSI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02045 507 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 154 181 IPR001736 GO:0003824
Vian4g02045 507 Pfam PLD-like domain 100 210 IPR025202 -
Vian4g02045 507 SUPERFAMILY Phospholipase D/nuclease 50 212 - -
Vian4g02045 507 SMART pld_4 154 181 IPR001736 GO:0003824
Vian4g02045 507 SMART pld_4 434 460 IPR001736 GO:0003824
Vian4g02045 507 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 434 460 IPR001736 GO:0003824
Vian4g02045 507 PANTHER PHOSPHOLIPASE D - RELATED 20 503 - -
Vian4g02045 507 Gene3D Endonuclease Chain A 47 214 - -
Vian4g02045 507 CDD PLDc_vPLD3_4_5_like_2 293 489 - -
Vian4g02045 507 CDD PLDc_vPLD3_4_5_like_1 28 195 - -
Vian4g02045 507 Gene3D Endonuclease Chain A 293 491 - -
Vian4g02045 507 SUPERFAMILY Phospholipase D/nuclease 306 503 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02045 K16860 - gmx:100778897 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02045 4 37282215 37286472 Vian4g02045 4 37282215 37286472 ECH