Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02032 ATGGCGACTACAGATAAAGAATTGGAAGACCAACTTCTCGAGGCCGGTAACAAACTCGCAGATCCTCCGTCATCCGTGGAGGACCTTCTCTCACTTCTAGACCAAGTAGAGAGCTTCCTATCAAAGGTTGAACAGTCACCTTCAAACTCTATGCAAATTGCACTCTCTCCATCATTGAAAGCATTGATTGCAGACAAACTTCTGAGGCACTCAGATGATGATGTCAAAGTCGCAGTTGCCTCTTGCATCAGTGAAATAACAAGAATCACTGCACCTGATGCTCCTTATGATGATGATCAAATGAAGGAGGTCTTTCAATTAATAGTATCTTCTTTTGAAAATCTACATGATACGTTAAGTCGATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTTGCAAAAGTCAGATCATGTGTTGTAATGCTGGATCTTGAATGTGATGCCCTGATTTTGGAGATGTTTCAGCATTTCTTTAAAGCAATAAGGGAATATCATCCAGAAAATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATATATCCTTAGACCTGCTGTCTACACTTCTGGCCAGAGTTAAAAAAGATGACAAGGAAGCTTTTCCAATTGCCAAAAAATTGGGTGAGAGGGTCCTTGAAAGTTGTGCAACCAAGCTTAAACCCTATTTGGGTCAAGCAGTGAAATCCTCGGGTATACCTATGGGTGATTATAGTTTGGTACTTTCTTCAATATGCCAAGACGCATCTGATGCCTTGGAGAAAAATTATACATGTGTTACAAGTGAGCACACGGAAGATAAGAGTGAGTTGGCAAAACGACCACGTGAGGAGTCGGCACATGTAGTCGAAAAGGATCCAAGGGAAGTTAGTAGTCCCTCTCAACAAGAAAATCCTGATGTGAATATATCTCCAAAGTCGGTCATGAGCAATGGTGTTGCATGCGTTGAAGAAGGTACTGCTTTAACTAATTCCAAGTCCATTAAAAAGCAAGAGGATGCTGAATGCTCTAATCACTCTGAAGGTTTGAATATATCTGGTCATGAGGTGTGTAATGATTTAGACTCTGAAAAAGTTGACAACAGTAAAAGTAAGCCAGAACAATCTACCAAGAGACGAAGGAAGAAATCAAGCTCTTCAACTAAATCTGCAAAACTTTCCAAGGGTCAAGTTGCTGCTAATGATAAGGAAACTGAGAAAAAACTTGAAAACAACAGCAAGAAAGTACCCAGTTCCCCTCACGAGGACCATTTTGTTGAAGCAGAAGCAGCAGGACCTTCAGAGAATGACAAAGAGGTTGATGCTAAGACTTTATCACCAAAGGTATACAACAATGAATCTGAAGTTGCTTCTCCACTAGGTGAGAACCTCCATGATGAAAGTCGATCGAAGAAACTTGGACGAACAAAAAGGAAAGATGGCCCTGTAAAAGATGTGGCTGGAGAAGATGTTTCTAAGGTTTCTGGGGGAGGAGCTAGTGATTCAGAAGCCAAACCTACGAGGCGGTCAATGAAAAAGGCACTTGGTCAGAATTCTGTGAGAAAGACTAGTGTTGTAGATTCAGTTAAAAAAGGAAGTGGGGCAGCAACTGATGCAGATGCTAAGAAGCATTCAGCGAAGAAATTAGATGAAAACAAAAAGGGTAGTGGCGGGTCCTCTTCAAAGCAGATTGGGGACAAGAAAAAGGGAGGGAGGACGAAAGCTAACCCTGAAACAGATCTAGCAAAATCAACTGCTACCGATGTGGACAGGGAAGTGGTTTCTTCTCCAAGGCCTGGTACAAAATCAACTAAAGATGAAAGTTCAGAGGAGACTCCCAAGGCAAATGTGAAAAGGAAACGCAGTTCAGGAAAAGAAAATGAGTCTGATGTGAAGGACTATGGTGAAAACCTTGTTGGTTTACGAGTCAAAGTTTGGTGGCCTGAGGATCGTGAGTTTTACAAAGGTGTTATTCATTCTTTTTATTCTGGCAAAAAGAAGCACAAGGTCTTGTACGATGATGGTGATGAAGAAACATTAAATCTCGTGAAGGAAAAGTGGAAGTTAATTGAAGCTGGTTCAGATGCAGATGAGGAAGGACAAAGTGATCGTGAAAGTCTTGATGCTTCCACCGATATGCCACCGAAGAAGAAAGGGAAAACCAGTGCTGGTGAATCAACTAAGCAAGGAAAGGTGGATGGTTCTTCCAAAAGCGGTGGAGCTGCAGCCTCCAGTAGATCAAAGGGTGTATCCGTGAAGTCTAGCCAAAAGTCCAAAGATGGAAACAAATCCAAAGATTCCAAGACTATTAGCAAATCTGAGGACCGAGTTAGCAGAAAATCTAAGGACGGTACTCCTAAAAGTGGTAGCAGTAAAATTGTTGCAGCTGCTGTTAAGAAAATGAGTAATAAATCCAAAAGCTCTGATACTTCCAAGGCTAACGAATCAAAGGATGATGACACTAGCAAGCCAAAATCTGCTGCCAAGTCTAAGCAAGAAACTCCAAAAGGTGGGAAATCCAAGCAAGAAACCTTGAAGTCTGCCATTTCTAAAGGAAAACCTCTTAAAGGTGGTGGAAAGAGTGATGCTAATGGTAGTGGTAAGGTGAAATCTGGTTTAACGAAGAGAAAATATGCGGAGGATGAAAACTCAGATGCTTGA 2658 0.4138 MATTDKELEDQLLEAGNKLADPPSSVEDLLSLLDQVESFLSKVEQSPSNSMQIALSPSLKALIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDDDQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLECDALILEMFQHFFKAIREYHPENVFSSMETIMTLVLEESEDISLDLLSTLLARVKKDDKEAFPIAKKLGERVLESCATKLKPYLGQAVKSSGIPMGDYSLVLSSICQDASDALEKNYTCVTSEHTEDKSELAKRPREESAHVVEKDPREVSSPSQQENPDVNISPKSVMSNGVACVEEGTALTNSKSIKKQEDAECSNHSEGLNISGHEVCNDLDSEKVDNSKSKPEQSTKRRRKKSSSSTKSAKLSKGQVAANDKETEKKLENNSKKVPSSPHEDHFVEAEAAGPSENDKEVDAKTLSPKVYNNESEVASPLGENLHDESRSKKLGRTKRKDGPVKDVAGEDVSKVSGGGASDSEAKPTRRSMKKALGQNSVRKTSVVDSVKKGSGAATDADAKKHSAKKLDENKKGSGGSSSKQIGDKKKGGRTKANPETDLAKSTATDVDREVVSSPRPGTKSTKDESSEETPKANVKRKRSSGKENESDVKDYGENLVGLRVKVWWPEDREFYKGVIHSFYSGKKKHKVLYDDGDEETLNLVKEKWKLIEAGSDADEEGQSDRESLDASTDMPPKKKGKTSAGESTKQGKVDGSSKSGGAAASSRSKGVSVKSSQKSKDGNKSKDSKTISKSEDRVSRKSKDGTPKSGSSKIVAAAVKKMSNKSKSSDTSKANESKDDDTSKPKSAAKSKQETPKGGKSKQETLKSAISKGKPLKGGGKSDANGSGKVKSGLTKRKYAEDENSDA 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02032 885 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 295 816 IPR039776 GO:0007064
Vian4g02032 885 MobiDBLite consensus disorder prediction 602 634 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 398 443 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 1 22 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 269 297 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 344 634 - -
Vian4g02032 885 SUPERFAMILY Tudor/PWWP/MBT 636 678 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 511 525 - -
Vian4g02032 885 Pfam Sister chromatid cohesion protein PDS5 protein 28 232 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 535 554 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 298 313 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 724 756 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 757 785 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 690 723 - -
Vian4g02032 885 FunFam Binding protein 633 685 - -
Vian4g02032 885 SMART TUDOR_7 634 693 IPR002999 -
Vian4g02032 885 SUPERFAMILY ARM repeat 49 234 IPR016024 -
Vian4g02032 885 MobiDBLite consensus disorder prediction 357 373 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 269 313 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 809 839 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 690 885 - -
Vian4g02032 885 CDD Tudor_Agenet_AtEML-like 638 688 - -
Vian4g02032 885 Gene3D - 634 683 - -
Vian4g02032 885 MobiDBLite consensus disorder prediction 459 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02032 Vian-Chr4 37007574 37024376 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02032 - - gmx:100809147 1212.98