Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02025 ATGGAAATGGCATATCGAGCTGCCATTTTTGACCATGCAAGAGTTAAAGAGAAACATGGGTTACAAATTGAAGATCTACTTGAATCTCGCTTGTGGATCTCCAATTCCAAATTTTATTGTCACTCAAATCCTCTTCAGAAAATGTCGATTATACCGAAAGGCGATTCGGTTCAAATCAGGGAGGTTTGGAACGATAACCTCGAAGAGGAGTTCGCGTTGATCCGCGAAATCGTGGACGAGTATAACTACGTGGCGATGGATACCGAGTTCCCCGGCGTGGTACTCCGTCCGGTGGGGAATTTCAAGAACATCAACGACTACAACTACCAAACGTTGAAGGACAACGTCGACATGTTGAAGCTGATCCAATTAGGTCTCACCTTCTCCGACGAGAACGGGAACCTTCCTACCTGCGGCTCCGAGAGTCCCTGCATCTGGCAATTCAACTTTCGCGAGTTCAACATCAGCGAAGACATCTTCGCTAGCGATTCGATCGAGTTGTTGCGCCAGTGCGGGATCGATTTCAAAAAGAACAGCGAGAAGGGAATCGACGTGAACCGGTTCGGGGAGCTTCTCATGTCCTCTGGAATCGTGTTGAACGACGCCGTTCATTGGGTTACCTTTCACAGCGGCTACGATTTTGGCTACCTCCTTAAGCTGTTGACATGCCGAAGCTTGCCGGATACGCAGGCTGGGTTCTTCGATTTGATCAAGATGTATTTCCCGATGGTGTATGATATCAAGCATCTGATGAAGTTCTGCAACAGCCTCCATGGTGGGTTGAACAAGCTAGCAGAGTTGTTGGAGGTGGAAAGGGTTGGTGTGTGCCATCAGGCTGGGTCTGATAGTTTACTCACTTCTTGTACATTTAGAAAGTTGAGGGATACATTCTTCAGTGGCTCAACGGAGAAATATGCTGGTGTCTTGTATGGTTTAGGTGTTGAGAATGGACAGACTAATTGA 963 0.4725 MEMAYRAAIFDHARVKEKHGLQIEDLLESRLWISNSKFYCHSNPLQKMSIIPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGSESPCIWQFNFREFNISEDIFASDSIELLRQCGIDFKKNSEKGIDVNRFGELLMSSGIVLNDAVHWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSCTFRKLRDTFFSGSTEKYAGVLYGLGVENGQTN 320
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02025 320 FunFam Putative CCR4-associated factor 1 7 49 316 - -
Vian4g02025 320 Pfam CAF1 family ribonuclease 62 183 IPR006941 -
Vian4g02025 320 SUPERFAMILY Ribonuclease H-like 59 312 IPR012337 -
Vian4g02025 320 Gene3D - 46 316 IPR036397 GO:0003676
Vian4g02025 320 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 57 313 IPR039637 GO:0004535|GO:0030014
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian4g02025 Vian-Chr4 36930877 36946201 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02025 K12581 - gmx:100798365 551.592