Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02020 ATGTCATCGTCGCCTTTTCCTTCCTGCTTCCGTCCCTCCCCCACCACCGACGTTCCCCCTCCTCCGCCGCCACCGCCGCCGCACTCCACAATCTCAAACCTCACAATCTACCACACAGACACAGGTCCCGTGTCCCTCACGTGGTCACGCTCCGTAGTGGGTCGCTCCCTTCACATTCAACTCCACCGCCAATCTTTCGACTCCATCTCCTTCCACCTCCACATACGACCCTTCGTCTTCTGGAAAAAGCACGGCGTGAAGAAGCTGGCCCCCGACACAGTCCTCTTCTGGAACCTTGCCAAGGCCAAATTCGGGTCGCACCCGGAACCCGTCTCGGGATTCTACGTTGCCCTTGTGGTTAACAGCCACATGAGCCTCCTCCTCGGCGACGCCGCCAGAGACGCGTATTCGAAGTCCCGGGCCCACCAACCGGCCACCCCGCAACTGCTCCTCCTCAAGAAAGAGCACGTCTTTGCCGACCGCGTCTACTCCACGCGCGCAACGTTCGGCGGACGGGCGCGTGAGATTCAGATCGATTGCGGTTTCAGGGACCACTCCAAACTCTCGTTCAGCGTGGACGGCGAGAAGGTGCTGCAGATTAAGCGCCTCAAGTGGAAGTTTCGCGGCAATGAGCGCGTCGTAGTTGACGGCGTGCACGTGCAAATCTCGTGGGATCTTTACAACTGGCTCTTCGACAAGAACAACGCCGACGCGCACGCCATTTTCATGTTCAAGTTCGAGGACGAGGAGGAGGAAGCGGTGGCTGATAGGAACTTGGCGGGGTTGTGGAATTTGGGGGTTTGTGAATGGGGCAAGACTTGGTCTTCTTCCTCGGTTTCTTCTTCTGGTGGGTCCTTCGGCGGAAGCTCCTCTGTTTTGGAATGGTCCAGTGTGGAGGAGAATGAATTGGTCGTTCCCGTTGGGTTTTCTTTGCTCGTTTACGCTTGGAAACGCTGA 957 0.5778 MSSSPFPSCFRPSPTTDVPPPPPPPPPHSTISNLTIYHTDTGPVSLTWSRSVVGRSLHIQLHRQSFDSISFHLHIRPFVFWKKHGVKKLAPDTVLFWNLAKAKFGSHPEPVSGFYVALVVNSHMSLLLGDAARDAYSKSRAHQPATPQLLLLKKEHVFADRVYSTRATFGGRAREIQIDCGFRDHSKLSFSVDGEKVLQIKRLKWKFRGNERVVVDGVHVQISWDLYNWLFDKNNADAHAIFMFKFEDEEEEAVADRNLAGLWNLGVCEWGKTWSSSSVSSSGGSFGGSSSVLEWSSVEENELVVPVGFSLLVYAWKR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02020 318 MobiDBLite consensus disorder prediction 1 28 - -
Vian4g02020 318 Pfam Plant protein of unknown function (DUF868) 42 317 IPR008586 -
Vian4g02020 318 MobiDBLite consensus disorder prediction 12 28 - -
Vian4g02020 318 PANTHER EXPRESSED PROTEIN 7 317 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02020 Vian-Chr4 36855032 36855988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02020 41 317 EF-hand Containing Proteins AT3G04860 32.281 1.20e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02020 - - gmx:100783731 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00465 7 11822126 11823136 Vian4g02020 4 36855032 36855988 PCT