Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02014 ATGGCAACTCCAAAGCCGGAGGAGATAAGCCACCCACCAATGGACCAACTTCAAGGCTTAGAGTACTGCATAGACTCAAACCCTTCATGGGTGGAGTCAATAGTTTTGGGTTTCCAGCATTACATTTTGGCCTTAGGAACTGCCGTCATGATTCCTTCTTTTCTTGTGCCTTTGATGGGTGGAACTGATGATGATAAAGTGAGGGTGGTGCAGACCCTGCTTTTTGTTGAAGGAATTAATACACTTCTGCAGACACTCTTTGGAACCCGGTTGCCAACAGTGATAGGAGGGTCTTATGCATTTATGGTCCCCATTATATCGATAATTCACGATTCCTCATTGACAACGATTGAGGACCCACATTTGAGATTTCTTAACACCATGAGAGCAGTACAAGGGGCAATGATAGTGGCATCAAGCATACAAATTATTTTGGGTTTTAGTCAATTATGGGGCATTTGTTCTAGGTTTTTCAGTCCTCTTGGAATGGTTCCAGTAATTGCATTAGCTGGTTTTGGGTTATTTGACCGAGGCTTCCCTGTGGTCGGTCATTGCGTTGAAATTGGAATTCCCATGTTGATTCTGTTTGTAGCCTTCTCTCAGTACTTGAAAAATTTTCATACTAGAGAGCTACCTATACTAGAGCGATTTGCCCTACTAATATCAACCACAGTGATATGGGCATATGCACATCTGTTAACAGCTAGTGGAGCATACAAACACCGTCCTGACTTAACCCAACATAATTGCAGAACAGACAGGGCCAACCTCATTTCTTCTGCTCCATGGATAAAGATCCCATACCCTCTTGAGTGGGGTGCTCCAACATTTGATGCTGGTCATGCTTTTGGAATGATGGCTGCTGTCTTAGTCTCCTTAATTGAGTCAACTGGGGCATACAAAGCTGCATCAAGACTGGCAAGTGCAACACCACCTCCTGCTCATGTTCTAAGCCGTGGTATTGGTTGGCAGGGAATTGGAATATTGCTGAATGGCCTTTTTGGAACACTCACTGGTTCATCAGTTTCTGTAGAGAATGTGGGGCTTCTTGGAAGTACTCGTGTTGGGAGTCGAAGGGTCATTCAAATCTCAGCTGGTTTTATGATATTCTTCTCAATGTTAGGAAAATTTGGAGCTTTATTTGCATCAATACCCTTCCCCATTTTTGCAGCAGTGTACTGTGTTCTGTTTGGCCTTGTGGCTTCTGTGGGGCTATCATTCTTGCAGTTCACTAACATGAACTCAATGAGGAACCTCTTTATTACTGGTGTAGCCCTTTTCTTAGGGTTTTCTGTTCCTGAGTATTTCCGAGAGTACAGTTCAAAGGCCCTTCATGGTCCTACTCATACAAGGGCAGGATGGTTCGATGATTTCCTTAATACTATATTCTTCTCATCTCCAACTGTTGCATTGATTGTTGCTGTGTTCTTGGACAACACTCTTGACTACAAGGATAGTGCCAAAGATAGGGGAATGCCATGGTGGGCCAAGTTTAGAACTTTTAATGGAGATGGCAGGAATGAAGAGTTTTATACCCTTCCTTTCAACCTTAACCGGTTTTTCCCTCCTCGGTAG 1575 0.4349 MATPKPEEISHPPMDQLQGLEYCIDSNPSWVESIVLGFQHYILALGTAVMIPSFLVPLMGGTDDDKVRVVQTLLFVEGINTLLQTLFGTRLPTVIGGSYAFMVPIISIIHDSSLTTIEDPHLRFLNTMRAVQGAMIVASSIQIILGFSQLWGICSRFFSPLGMVPVIALAGFGLFDRGFPVVGHCVEIGIPMLILFVAFSQYLKNFHTRELPILERFALLISTTVIWAYAHLLTASGAYKHRPDLTQHNCRTDRANLISSAPWIKIPYPLEWGAPTFDAGHAFGMMAAVLVSLIESTGAYKAASRLASATPPPAHVLSRGIGWQGIGILLNGLFGTLTGSSVSVENVGLLGSTRVGSRRVIQISAGFMIFFSMLGKFGALFASIPFPIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGFSVPEYFREYSSKALHGPTHTRAGWFDDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWAKFRTFNGDGRNEEFYTLPFNLNRFFPPR 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02014 524 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 3 522 - -
Vian4g02014 524 Pfam Permease family 33 436 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vian4g02014 524 NCBIfam purine/pyrimidine permease 34 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02014 Vian-Chr4 36782811 36786589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02014 5 523 Organic Solute Cotransporters AT2G34190 86.127 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02014 - - gmx:100820526 1036.17