Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02005 ATGTATAGAGTAGCAAAGGCATCAGAGTATCTTGTGATAACTGGAGTTGGAATCACAGACATAAAGCTTGCAAAGAAAGCATGGATTCTCCCAGGGCAGTCATGCAGCGTCTTCGACCTCTCTCCTGTGAACTACACTTTCGAGGTTCAAGCCATGAGCGCAGAGAAGCTCCCTTTCATTCTCCCCGCTGTCTTCACCATCGGTCCCAGAGTCGACAACCACGACAGCCTTCTCAAATACGCCAAACTTCTCTCTTCCCACGACAAGCTCTCGCACCACGTTAAGGAGCTAGTCCAGGGCATCATCGAGGGAGAGACACGTGTCCTTGCGGCATCCATGACCATGGAGGATGTTTTCAGAGGCACCAAGTCGTTTAAACAGGAAGTGTTTGACAAGGTTCAGTTGGAGCTCAACCAATTTGGGCTTCTCATCTACAATGCCAACGTGAAGCAACTGGTGGACGTGGTTGGCCACGAGTACTTCTCTTATTTGGGTCAGAAGACTCAGATGGAGGCTGCCAACCAAGCCAAGGTTGACGTGGCAGAGGCAAGGATGAAGGGAGAGGTTGGAGCCAAGTCGAGGGAGGGGCAGACGTTGCAGAACGCTGCGAGGATCGATGCGGAGACAAAGATAATATCGACGCAGAGGCATGGAGAGGGAGTGAAGGAGGAGATAAAGGTGAAGACGGAGGTGAAGGTGTTTGAGAATGAGCGAGAGGCGGTGGTGGCGGAGGCTAATTCTGAGCTTGCGAAGAAAAAGGCTGTGTGGGCACAAACGGCGCAGGTGGCAGAAGTGGAGGCCACAAAAGCAGTCGCACTAAGGGAAGCCGAGTTGCAGAGAGAGGTTGAGAGGATGAACGCTCTCACTAGGACAGAGAAGCTTAAAGCCGAGTTCCTCAGTAAAGCAAGTGTTGAATACGAAACCAAGGTACAAGAGGCAAATTGGGAGCTGTACAAGAAGCAAAAAGCTGCAGAAGCAATACTGTTTGAGAAGGAGAAAGAGGCAGAAGCACAAAAAGCACTGGCAGAGGCAGCATATTTCAGTCGACAACAAGCAGCGGAGGCAGAACTATTTGCAAAGAAAAAGGAGGCAGAAGGACTTGTGGCAATTGGACAAGCCCAAGGGGTATACTTGAGAACACTTCTTGATGCACTGGGAGGCAACTATGGTAATCTAAGGGACTACTTGATGATAAATAATGGGATGTTTCAAGAGATTGCGAAGACTAATGCAGACGCCATTCGAGGACTTGAGCCAAAGATTAGTATTTGGACTAATGGCGGAAATGGAAGTGATGTCGGTGGTGGAATGAAGGATGTAGCTAATGTGTACAAGATGTTACCACCTTTGTTTAACACAGTGCATGAGCAAACTGGTATGCTGCCACCCGCTTGGATGGGAACCCTGTCTGACAAAAGTTCTTAA 1425 0.4919 MYRVAKASEYLVITGVGITDIKLAKKAWILPGQSCSVFDLSPVNYTFEVQAMSAEKLPFILPAVFTIGPRVDNHDSLLKYAKLLSSHDKLSHHVKELVQGIIEGETRVLAASMTMEDVFRGTKSFKQEVFDKVQLELNQFGLLIYNANVKQLVDVVGHEYFSYLGQKTQMEAANQAKVDVAEARMKGEVGAKSREGQTLQNAARIDAETKIISTQRHGEGVKEEIKVKTEVKVFENEREAVVAEANSELAKKKAVWAQTAQVAEVEATKAVALREAELQREVERMNALTRTEKLKAEFLSKASVEYETKVQEANWELYKKQKAAEAILFEKEKEAEAQKALAEAAYFSRQQAAEAELFAKKKEAEGLVAIGQAQGVYLRTLLDALGGNYGNLRDYLMINNGMFQEIAKTNADAIRGLEPKISIWTNGGNGSDVGGGMKDVANVYKMLPPLFNTVHEQTGMLPPAWMGTLSDKSS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02005 474 Gene3D Band 7 domain 38 155 IPR036013 -
Vian4g02005 474 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Vian4g02005 474 PANTHER FLOTILLIN-RELATED 1 470 IPR027705 -
Vian4g02005 474 CDD SPFH_flotillin 28 175 - -
Vian4g02005 474 Pfam SPFH domain / Band 7 family 10 183 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02005 Vian-Chr4 36672178 36673693 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02005 K07192 - gmx:547522 791.186