Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01990 ATGGGTTGGAGATACAAAGCTGGCTTGTTCCTAATAGCCACTGTCGTTGTTATTTGGGTTACCTCCGCTGAAGTTACCCAGGATATTTTTACAGATTATAAGCAGCCGTTTGCAGTAACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGACTGGTTCTGTAACTTACTTAAATCCCGCTCCTCTAAAAGTGGTAAAAATGCAGAGTGCGTGGATGAGTTTTCTGTCAGCATTAGCTCTCCTCTCAAAAGCAATGGAGTGCAGAAAAACTTTGAACTAGAACTGGGGAGTGTGATTCGGAAAGATAGTGATTTAGACCTTGCGACACTTTCAGAAGTAAAGCCATTGGTAGCTAAATATAATGATAATACTAATGTGCTAAAGGTGGAGAAAGAACTTACTGCTAAGGAAATTGCTGCTTATGGGTTTTACATTGCACCTATCTGGTTTATAACAGAGTACCTATCAAATGCTGCCCTTGCACGAACAAGTGTTGCAAGTACAACAGTATTATCATCAACTTCAGGACTTTTCACACTTTTCATTGGTGCATTTATGGGTCAAGACTCTTTAAATGTAGCAAAAGTAGTTGCTGTCTTAGTCAGCATGGCTGGGGTTGTCATGACAACAATGGGGAAAACTTGGGCTGCGGATGAATCTCAATTAAGTGATGCCAATGGAAAACATTCTTTGGTTGGCGATCTTTTTGGAATTCTCTCAGCTATGTCATATGGCCTATTTACAGTTCTTCTTAAGAAATTTTCTGGCGAAGGAGAAAGGGTTGATGTGCAAAAGCTGTTTGGGTATATTGGATTGTTTACCCTAGTAGCACTGTGGTGGCTTGTCTGGCCATTGATGGCCTTGGGAATTGAACCAAAATTCAGCATTCCCCACTCTGCTAAACTGGACGAAGTGGTTCTTGCAAATGGATTTATTGGAAGCGTACTTTCAGATTACTTCTGGGCACTTTGCGTGGTATGGACTACTCCCCTTGTGGCCACTTTGGGTATGTCACTCACCATTCCTCTGGCAATGGTGGCTGACATGGTAATTCATGGTCGACATTATTCAGCAGTATACATTCTTGGCTCAGCTCAGGTATTTGCAGGCTTTGTAATAGCTAATCTTTCAGACAGGTTGACGAAGAAGTTGGGATTGTAG 1182 0.4154 MGWRYKAGLFLIATVVVIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFCNLLKSRSSKSGKNAECVDEFSVSISSPLKSNGVQKNFELELGSVIRKDSDLDLATLSEVKPLVAKYNDNTNVLKVEKELTAKEIAAYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDSLNVAKVVAVLVSMAGVVMTTMGKTWAADESQLSDANGKHSLVGDLFGILSAMSYGLFTVLLKKFSGEGERVDVQKLFGYIGLFTLVALWWLVWPLMALGIEPKFSIPHSAKLDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAVYILGSAQVFAGFVIANLSDRLTKKLGL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01990 393 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 3 390 - -
Vian4g01990 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 220 - -
Vian4g01990 393 Pfam EamA-like transporter family 139 217 IPR000620 GO:0016020
Vian4g01990 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 278 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01990 Vian-Chr4 36565302 36569953 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01990 K15289 - gmx:100792013 717.998