Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01988 ATGGGATTCTTCGGCGGCATGATCGTCGGTATCGCCATTGGTATCGTGTTGATCATCGGTTTCGCTCGTCACGAGAGCGTTCGATCCAAACGTCGCTCCGATTTGGCGAAGACGATAGCAGCGTTTGCTAGAATGACAGTGGAAGATTCCAGAAAACTTTTGCCTCCTAAGTTCTATCCATCATGGGTGTTAAATTGGCTTAATGTCCAACTCAGGAGGATTTGGCCACATGTTGATGAGGCAGTGTCAGAGTTGATAAGAACCAATGTGGAACCAATTCTTGAACAATATAGACCGGTTGTTTTGGCTTCTCTCACCTTCTCCAAGTTGACCCTTGGCACTGTGGCTCCACAATTTACAGGAGTTACTATTCTTGAAGAGGATAGTGGGCCTGATGGTGTGACTATGGATCTTGAGATGCAATGGGATGGTAACCCGAATATCGTTCTTGACATCAAAACCCGAGTTGGTGTCGTACTTCCTGTACAGGTAAAAGATATTGGATTCACTGGGGTTTTCAGGTTGATCTTCAAACCACTAGTGAATGAGTTCCCGGGTTTCGGAGCTGTTTGTTTTTCCTTGAAAGAAAAGAAAGATCTGGATTTTACTCTGAAGGTTATTGGTGGTGATTTATCAGCCTTGCCGGGAGTATCTGATGCAATAGAGGTGTTGGATCTCCTAGTTGTGCGATAA 693 0.4488 MGFFGGMIVGIAIGIVLIIGFARHESVRSKRRSDLAKTIAAFARMTVEDSRKLLPPKFYPSWVLNWLNVQLRRIWPHVDEAVSELIRTNVEPILEQYRPVVLASLTFSKLTLGTVAPQFTGVTILEEDSGPDGVTMDLEMQWDGNPNIVLDIKTRVGVVLPVQVKDIGFTGVFRLIFKPLVNEFPGFGAVCFSLKEKKDLDFTLKVIGGDLSALPGVSDAIEVLDLLVVR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01988 230 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 222 IPR045050 GO:0008289
Vian4g01988 230 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 60 230 IPR031468 GO:0008289
Vian4g01988 230 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 65 226 IPR039010 -
Vian4g01988 230 CDD SMP_SYT 60 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01988 Vian-Chr4 36540446 36544069 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01988 - - gmx:100787972 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01988 4 36540446 36544069 Vian4g01988 4 36540446 36544069 ECH