Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01984 ATGCAGAGACGAAGTCCTCCCAAGCACAGACACGATGGAACTTCGCCGCTGCCTCTCGGTATGGATTGGAGTCCTGCGCCTCGAAAATGGAATGGGCAAGATACAGTATGGCCACACAATCATCGTACTGGATGGAGTTATTGTGTCACAATACCGTCTTGGTCCTTTGTTCCAAAATCAAGGAATTCAGATCCTGTAGTGTTCTACAGGGTTCAAGTTGGTGTACAGTCACCGGAAGGGATTACTAGGCTCCATGGAGTATTAAGAAGGTTCAATGATTTTTTAAAGTTGTTTGCTGATCTTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCTCCGCCCAAGGGACTCTTGCGTTTGAAAAGCCGAGCTTTGTTAGAAGAGAGAAGGTGCTCTTTGGAAGAGTGGATCACGAAACTATTGTCTGACATTGATGTATCAAGATGTGCTGCAGTGGCATCATTTCTCGAACTAGAAGCAGCTGCTAGATTTTCATTCCAAGATGCAAGCCAGCAAAATTCTGAAACAGATCCTGATTCCAATAACACAGTTTATTCTGTGCAATCGCCTCTCCAGTCAAGCTTATCGTTACTTGCTGGCAGTTCATCAGTTGCCTCTGATTATGGTAGTGATACCGCATATGAGCCATCTGACCTAGGAACACCAAGAGTTGGACGGGATGATAATTCTGATGTTGGTACGGATGATCTAACATTAGATGAAGATATGACAAATCCAATAGAAAAGCTAGTGAAATATGGCATATCAAATATTGACGAAGGTTTATTTATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTACCTAGGCATAAAGCAAATTCCAGACATGTGAACTATGTTACAGAGAAGGACAAGAATAATGGAAATTTATACGACTCTTCACTTTTAGGTAATAATACCATGGAGCTTTTCTCTGAGCCTGGGCATAGCAAGGTTGTTGGTCATGTGCGTAAGCTTTCAAATGAGAGTTTTGGAAGTGAAGGAAGCTCATTACGTGGTAGTGACATCTCTAATTTTGGGATTCCAAATTCCTCTGGTGAGGGCTTTCATGACCTTCCTGGATCTGCTTCGGTTTCAAGAGACACGGATATGATGGGCCACACAAAGTTGAAATCTACTGGTGATACTCAATTAGTCTTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTCAACCATGCAACGAAGGCTAGGCACTGCAAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAACTGCAAAGGATTTTCTTGCAACTAAGGTCAAGGATTTGGAAGTAGAACTTGAAACTACCAAACAGAAAAACAAGGAGAACTTACAGCAGGCTATTCTAATTGAGAGAGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACGAAAATCAATGGAAATGGAGATGAATCTAAAGTCAGAATCGGGGGGGAATTCTTACCAGAATTCAACAAAGGAATCAATTGTTCTGCAGAATGATGTACTGTTACAGAATTTAGAAACTACTAAAGAACATCTAGAAGTTTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAGGCAGATCTTAAAGTTCTGGTTAAAGAGGTCAAATCTCTTCGTAATTCCCAAACAAAGTTAAAGAAAGAGCTTAGTGAGTCGATAAAAGAAAACAGTGAAACTGAGAAACTACTACTTCACGAAAGAGAAAGGAGGGAACGGGCAGAAGCTGCGCGGAGAAAACTGCTGGAGAAATGCAGGTTTCTTTTCAACCAGCTTCAGGAGTGCAATGTTAGTCTTCCTTATGAATGTGAAGATAGAACAGTCATGAATTCATCGTCATTGAGTGATGCTTTTAATCAATTAACGACATCCGATGACCAAATGGACATCCTATTATCAGAGGTAGAAAACTTAGATAAGGAATATGGAAGTGCGGTTTCCAGTGTAGATAAAGCCAATGGCACCAAAGATGGTGTAATCTATGATGATGAAGTGGGTAAGATCATAGCAGACTTGTTCATGGATAATGTTAGACTGAGAAAACAGACAAACCGTGTCACAAGGCATGCTCTCAAATTGGACATGACAGCAACTGATGATACCCCTTCAATGGAAACTATATCAAGTATTTAG 2163 0.4055 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGQDTVWPHNHRTGWSYCVTIPSWSFVPKSRNSDPVVFYRVQVGVQSPEGITRLHGVLRRFNDFLKLFADLKKEFPRKNIPPAPPKGLLRLKSRALLEERRCSLEEWITKLLSDIDVSRCAAVASFLELEAAARFSFQDASQQNSETDPDSNNTVYSVQSPLQSSLSLLAGSSSVASDYGSDTAYEPSDLGTPRVGRDDNSDVGTDDLTLDEDMTNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKANSRHVNYVTEKDKNNGNLYDSSLLGNNTMELFSEPGHSKVVGHVRKLSNESFGSEGSSLRGSDISNFGIPNSSGEGFHDLPGSASVSRDTDMMGHTKLKSTGDTQLVFPLDQRNKLNRILSTMQRRLGTAKTDMEDLIVRLNQEITAKDFLATKVKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSMEMEMNLKSESGGNSYQNSTKESIVLQNDVLLQNLETTKEHLEVLSKQYGELEAKSKADLKVLVKEVKSLRNSQTKLKKELSESIKENSETEKLLLHERERRERAEAARRKLLEKCRFLFNQLQECNVSLPYECEDRTVMNSSSLSDAFNQLTTSDDQMDILLSEVENLDKEYGSAVSSVDKANGTKDGVIYDDEVGKIIADLFMDNVRLRKQTNRVTRHALKLDMTATDDTPSMETISSI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01984 720 MobiDBLite consensus disorder prediction 210 241 - -
Vian4g01984 720 Coils Coil 539 566 - -
Vian4g01984 720 Gene3D - 46 186 IPR036871 GO:0035091
Vian4g01984 720 SMART PX_2 43 160 IPR001683 GO:0035091
Vian4g01984 720 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 715 IPR044588 GO:0015031
Vian4g01984 720 Coils Coil 429 456 - -
Vian4g01984 720 MobiDBLite consensus disorder prediction 1 24 - -
Vian4g01984 720 FunFam Phox (PX) domain-containing protein 46 182 - -
Vian4g01984 720 Pfam PX domain 87 158 IPR001683 GO:0035091
Vian4g01984 720 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Vian4g01984 720 Coils Coil 574 601 - -
Vian4g01984 720 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Vian4g01984 720 Coils Coil 507 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01984 Vian-Chr4 36464669 36474361 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01984 - - gmx:100792151 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01984 4 36464669 36474361 Vian4g01984 4 36464669 36474361 ECH