Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01979 ATGCCTCTAAAACCGTCCTATTCGGCGGAGAATCTGATGCTTCCGGTATCCGATCCTCCCAACGAAGAAGACAGAGAGAGGCTTTTGAAGAGCGATAGTAAGACCTTCCGAGGACGAAGGATTTACGCTGCCATCTCTTACATGTCATGTGCAGTGCTCTTGATACTGTTCAATAAAGCTGTTCTTTCCTCCTATGACTTCCCGTCTTCGAGTATCGTCACGCTTCTTCAGATGGTATGTTCATGTTGTTTTCTTTATGTATTGAGGCGCTGGAGGATGATTTCTCTCATAGCAGGCGAATCAGTTATTACAGCAGATAACTCGAAGAAGTTTGTGCCACTGAGGACTTTGAAGCACACTCTTCCTCTAGCAGGAGCATATTTACTTTACATGTTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTACACCACCCTTAGGAGGACCACAGTGGTATTTACAATGCTTGTAGAATATATGCTGATGGGGAATAGGTACACATCTTCTGTCACTTTCAGTGTTGGCTTGATTGTCTTCGGTGCATTTATTGCGGGAGCACGGGATTTCTCCTTTGATGCCTATGGCTATGCCATTGTTTTCCTGTCAAACATCACTACAGCTATATATCTTGCAATGATAGCCCGTGTTGGAAAAACTAGTGGCCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTATCATATGTGGGCCCTTTTTGGTTATTTGGACGTTAGTACGGGGTGACTTGAAGATGACACTCAACTTTCCATACCTTTTTTCACCTGGTTTTATTGTTGTTTTACTTTTTTCCTGCATACTTGCTTTCTTCCTGAATTACAGTATTTTTCTGAACACAACTCTCAATTCAGCTCTGACTCAGACAATATGTGGTAATCTGAAGGATCTATTCACTATTAGCTTTGGCTGGATAATTTTTGGTGGGCTACCATTTGATTTTGTGAGTACTCTTGTCCCGACTGATTTTTTATCATTCGAGGTATTTTTCTTGTTCATATGCGTTTTTGTTGCAGTGGAATGTAGTGGGGCAACTTCTGGGTTTTGTGGGCTCTGGTTTATTTGCCTACAATAA 1098 0.4189 MPLKPSYSAENLMLPVSDPPNEEDRERLLKSDSKTFRGRRIYAAISYMSCAVLLILFNKAVLSSYDFPSSSIVTLLQMVCSCCFLYVLRRWRMISLIAGESVITADNSKKFVPLRTLKHTLPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYMLMGNRYTSSVTFSVGLIVFGAFIAGARDFSFDAYGYAIVFLSNITTAIYLAMIARVGKTSGLNSFGLMWCNGIICGPFLVIWTLVRGDLKMTLNFPYLFSPGFIVVLLFSCILAFFLNYSIFLNTTLNSALTQTICGNLKDLFTISFGWIIFGGLPFDFVSTLVPTDFLSFEVFFLFICVFVAVECSGATSGFCGLWFICLQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01979 365 PANTHER SOLUTE CARRIER FAMILY 35 41 320 - -
Vian4g01979 365 Pfam Triose-phosphate Transporter family 51 316 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01979 Vian-Chr4 36423935 36429292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01979 17 283 Organic Solute Cotransporters AT2G13650 23.741 3.52e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01979 K15281 - gmx:100778544 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01979 4 36423935 36429292 Vian4g01979 4 36423935 36429292 ECH
Vian7g00427 7 11126459 11138562 Vian4g01979 4 36423935 36429292 PCT