Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01975 ATGTCGCCGATCAAGTGCTGGGCCACCAGGATTTCCGGGCACGCCAACAACCGCGAGCTCAAGGTTACCCAACTCAAGCTCCAATTGGGTCTCTTCGGAACCACCCTGGGTTCCCCCAACGACAAGCTCGCCTTCGAAATAACAGGAACCGCTACGAACAAAGAAAAGAAACCTTCCAATTCTTCCAAACAGAAAACGACACCTCTCTCACTCGCTCCTTTCTCAAAACGACGATGTTCTCACGCAACCTCTTCCTGTAGGTCCATCAGTTCCAAATCCCCCTCTCTAACATGGGACGAGCGCGACCTCTGCGCTTTTCATCTTCTTCTCAAAGACAACCCCCTCGATGTTTGCGACCTCGCATTTCTTGTCTTATATGGAGAGGGAGGTGGGGGAGAAGCGAAAGCGAAGATGACGGTGGTCGGAAAAGCGGAAATGAGCGTGACGGTGGCGGAGCTGGCGGGGAGGGAGGAGAAGAAGACGAAGTCCAATTCTCATAATCAGTTTCAAAGAAGGCTTCCAATCAAGTTGAGGGTCAATGGTTTATGCATAGAAGCTACCCTTTTGGTCTCTATAAGGTTATTGAAGTTGAGAGATTCTGATTCTAAGGGTGACTCGGTTTCAGCAAAACCCTTTGAAAACAGCGTCCAGCCGAAGAAGAAACACGGGATTATAGAGAAAGTAAAGCATTTCACAAGCTTGGGAAAGAAAAACAATGGCAAGATTGACGAATCAAAACAAACCAGTCCTTGTGACTCGGATAGATCCCCCATGTTTGACTCGGATGACTCGTCCAACGATTCCAACACAAGCAGTGCTAGCAACAACAGTGGTACCCACAACACACGGCCAACACTCACAAAGGGCTCTGAGAGATTTACAACCTCAGACAGAAAGACCCGTTTGCAGAAGAATAGAAGCCTCAATGGGTGGAACTTTCAGACACCCACTACTGACAAACAACAAACTCAAACCTCGTATCCTGGTCCCTTCACGAAATCAAATGAAGTTTATCCACAAGTATACCAGAAAGGCACTGCAAAAAATTGGGAATACAGGGAGATTAAAAGTAGAGATGGGAAGGCAAAGCTGAAAACCAATGTATTTTTTGCTTCCTTTGACCAAATGAGTGAAAGAGCTTGTGGTGAGAGTGCGTGCACGGTTTTAGTTGCACTCATAGCCCATTGGCTTCACTCAAACCATAGTATGCCAACGAGAGCGCAATTCGAGAAACTCATCACACAAGGTTCATCAGAATGGAGAAGGCTATGTAACAGTGATTACTACTCGAAGCTCTTCCCAGATAAACATTTTGACCTTGAGACGATCATCGAAGCCAATCTAAGACCTCTTGTTGTTCTGCCTCAGAAATCGTATACGGGGTTTTTCTCCCCTGAGAAGTTTCAGTGCTTAAAAGGAGCCATGTCGTTTGATGAAATTTGGGACGAGATAAAGATGAAGGTGGGTGATCATGAGCCAAGAATTTACATAGTGAGTTGGAATGATCATTTCTTTGTGTTGAAGGTAGAAAGAGATGCTTACTACATCATTGACTCTTTGGGGGAGCGACTTTTTGAGGGGTGTCAACAGGCATTCATATTGAAGTTTGATGATTCGAGTTTGATTTATAAGAAACACACCACAAAAGAGGAGCCTTCAAAGGGAGAAAGTCGTGAGATAATTTGTCGTGGAAAAGAGTGTTGTAAAGAGTTCATCAAACGCTTTCTGGCGGCTATACCACTTTGGCAAATGGAGAAGGAGGAGAAGAAATGGAGTGTTTCAAGTCCCTATCTTCATCGACAATTGCAGATCGATTTCCATTATAGCTCTTCTTCTTCCTCTACCTCTTCTTCTTCTTCATCGTCATCATCTTATTCTTCTTCTTCTTCTTCTGTTACTTCAACTGATTCTTTGTGGTCTCTCTTATCAAGTGGAACATTGAATTAG 1947 0.4458 MSPIKCWATRISGHANNRELKVTQLKLQLGLFGTTLGSPNDKLAFEITGTATNKEKKPSNSSKQKTTPLSLAPFSKRRCSHATSSCRSISSKSPSLTWDERDLCAFHLLLKDNPLDVCDLAFLVLYGEGGGGEAKAKMTVVGKAEMSVTVAELAGREEKKTKSNSHNQFQRRLPIKLRVNGLCIEATLLVSIRLLKLRDSDSKGDSVSAKPFENSVQPKKKHGIIEKVKHFTSLGKKNNGKIDESKQTSPCDSDRSPMFDSDDSSNDSNTSSASNNSGTHNTRPTLTKGSERFTTSDRKTRLQKNRSLNGWNFQTPTTDKQQTQTSYPGPFTKSNEVYPQVYQKGTAKNWEYREIKSRDGKAKLKTNVFFASFDQMSERACGESACTVLVALIAHWLHSNHSMPTRAQFEKLITQGSSEWRRLCNSDYYSKLFPDKHFDLETIIEANLRPLVVLPQKSYTGFFSPEKFQCLKGAMSFDEIWDEIKMKVGDHEPRIYIVSWNDHFFVLKVERDAYYIIDSLGERLFEGCQQAFILKFDDSSLIYKKHTTKEEPSKGESREIICRGKECCKEFIKRFLAAIPLWQMEKEEKKWSVSSPYLHRQLQIDFHYSSSSSSTSSSSSSSSSYSSSSSSVTSTDSLWSLLSSGTLN 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01975 648 MobiDBLite consensus disorder prediction 262 291 - -
Vian4g01975 648 MobiDBLite consensus disorder prediction 609 636 - -
Vian4g01975 648 MobiDBLite consensus disorder prediction 215 261 - -
Vian4g01975 648 MobiDBLite consensus disorder prediction 201 334 - -
Vian4g01975 648 MobiDBLite consensus disorder prediction 305 334 - -
Vian4g01975 648 PANTHER C2 NT-TYPE DOMAIN-CONTAINING PROTEIN 7 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01975 Vian-Chr4 36399789 36402731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01975 - - pvu:PHAVU_009G092800g 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01975 4 36399789 36402731 Vian4g01975 4 36399789 36402731 ECH
Vian7g00426 7 11122898 11123773 Vian4g01975 4 36399789 36402731 PCT