Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01934 ATGAGCAAGAAGGTGAGAGAAGCGTGTGAGAATCACGGTTGCTTCATCTTGAAGTGTGATGCGATCCTCCCCAAGAGTGTTTGTGAAGAAATGTTTCATCACATGAAAGCTTTGTTTGATTTGCCTGAAGAAACGAAACAACAATACGTAACTCCAAAGCCTTATAGGAAGTACAATGGCAAGAACTCTGTCATCCCCCTTTGTGAAAGCTTTGGCATTGATGATATTCCTCTCTCAGATAAGGCTGAAGCCTTCACTAACCTCATGTGGCCACAAGGAAATCCACATTTCTGTGAGACACTAAAGACCATGAGCTTGAAGATGGTAGAGCTAAGTTTCCTTGTCTTGAAAATGGTAGTGGAAGGTTATGGTCTTCCCCAACATTACATTTCAGATGCTGAAAACATGAAAAACTCTAGCTATTCACGATTGATCAAGTACAAAGTTTCTGAAAGCAATAATGAATGTGAAACTTGTCTTCCACCTCACACAGACAGTAGTTCTTTAACCGTTTTATGCCAGAAAGATGTTCAAGGACTTCATGTATTATCCAAAATAGACAAATGGATTGAATTAGAGATACCCCATGATGGATTTGTAGTCCTTGTTGGTGATATACTAAAGGCATGGAGCAATGGAAGACTTCATGCAGTCACACACAGAGTGACGTTGAGAGGAGTGAAAGAGAGATACTCATTTGGACTTTTTGCAAACCCAAAGGAAGAGATGAAAATTGAGGTTCCCGATGAGTTGGTGGATAATGAGATTCATCCTTTACGTTATCGTCCATTCAATTATGGAGAGTATTTTAACTACTTTGTTTCAAATCCCATTGAAGCTCTTGAAGTGTTCGCAGGTATTTGA 864 0.3958 MSKKVREACENHGCFILKCDAILPKSVCEEMFHHMKALFDLPEETKQQYVTPKPYRKYNGKNSVIPLCESFGIDDIPLSDKAEAFTNLMWPQGNPHFCETLKTMSLKMVELSFLVLKMVVEGYGLPQHYISDAENMKNSSYSRLIKYKVSESNNECETCLPPHTDSSSLTVLCQKDVQGLHVLSKIDKWIELEIPHDGFVVLVGDILKAWSNGRLHAVTHRVTLRGVKERYSFGLFANPKEEMKIEVPDELVDNEIHPLRYRPFNYGEYFNYFVSNPIEALEVFAGI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01934 287 FunFam 2-oxoglutarate-dependent dioxygenase DAO 1 286 - -
Vian4g01934 287 Pfam 2OG-Fe(II) oxygenase superfamily 148 238 IPR044861 -
Vian4g01934 287 Gene3D - 1 284 IPR027443 -
Vian4g01934 287 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 137 239 IPR005123 -
Vian4g01934 287 SUPERFAMILY Clavaminate synthase-like 3 276 - -
Vian4g01934 287 Pfam non-haem dioxygenase in morphine synthesis N-terminal 2 61 IPR026992 -
Vian4g01934 287 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01934 Vian-Chr4 35940904 35942051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01934 91 269 Glycosyltransferase AT5G59530 25.824 2.86e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01934 - - gmx:100790408 474.937