Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01929 ATGAAGCAAACCCCTCTTGTGGTGGCTTCAATACTCAATGGAACTTTGCTTCTCGTTGCATTCGCTCTTATCCAAGAAGCACATGCAACTGCAAAAATCGGTGTTAATTATGGAACAGTCGCAAACAACCTTCCTCCACCTTCTGAGGTAGCAAAATTCCTCTCCAAATCCACCACAATCAACAGGGTCAGAATCTTCGACGCCAACCATGAAATTCTACACGCTTTTGCCAACACCGGCATAGAGGTAACCATAACTGTCCCCAACGACCAAATCCCCCAAATAACTAACTTAACCTTCGCACAGCAATGGCTCAAAACCAACGTCCAACCGTTCCTCCCCGCCACCAAACTAATCCGAATCCTCGTCGGCAACGAAGTGCTCTCCACCGCCAACAAACTCCTCATCAGCAACCTCGTACCCGCCATGCAAACCCTTCACGTGGCCCTCGTCACAGCGTCGTTGGACAACAACGTTAAAGTCTCAACTCCACACTCTTTGGGCATTTTGTCAAACTCAAGCCCTCCCTCATCGGCCAAGTTCAGACAAGGCTACGACATGCACATTATCAAACCCATGCTTAGTTTTCTCAAAGATTCCGATGCACCCTTCATGGTTAACCCTTACCCTTTTTTCGGATCCTCTGCCACCAACCTTGATTATGCACTCTTTCGGACCAATTCGGGTGTATTCGACGACAACACCAATCTCCGATACACCAACATGCTGGACGCGCAACTCGATGCTGTTTATTCTGCCCTGAAGGTTTTGGGTTTTGAGGACGTTGAGATTGTCATTGCCGAAACGGGCTGGCCCTCCCTTGGTGATCCGGCCCAAACTGGTGTTGACCCGAAGATTGCTTCTGAGTACAATGGAAATCTCATACGACACGTCAATTCTGGAGTTGGAACACCACTCATGCCTAACAGGACTTTCGATACCTATATTTTTGCTTTATTTGATGAAAATTTAAAGCCCGGCCCAACTTGTGAGAGGAATTTTGGGCTCTTCTGGCCCAATATGACTCTAGTTTATGATATCCCAATAATGAGGAGCTATGCAGCTGTAGTTGGTGATAGACATTATTATAAAGTTTTTTTCTCATTCATGATCGTGTTCAACTTCATTTGTACATCATGGGTTTAA 1146 0.4616 MKQTPLVVASILNGTLLLVAFALIQEAHATAKIGVNYGTVANNLPPPSEVAKFLSKSTTINRVRIFDANHEILHAFANTGIEVTITVPNDQIPQITNLTFAQQWLKTNVQPFLPATKLIRILVGNEVLSTANKLLISNLVPAMQTLHVALVTASLDNNVKVSTPHSLGILSNSSPPSSAKFRQGYDMHIIKPMLSFLKDSDAPFMVNPYPFFGSSATNLDYALFRTNSGVFDDNTNLRYTNMLDAQLDAVYSALKVLGFEDVEIVIAETGWPSLGDPAQTGVDPKIASEYNGNLIRHVNSGVGTPLMPNRTFDTYIFALFDENLKPGPTCERNFGLFWPNMTLVYDIPIMRSYAAVVGDRHYYKVFFSFMIVFNFICTSWV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01929 381 SUPERFAMILY (Trans)glycosidases 33 347 IPR017853 -
Vian4g01929 381 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Vian4g01929 381 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 348 IPR044965 GO:0004553|GO:0005975
Vian4g01929 381 Gene3D Glycosidases 31 355 - -
Vian4g01929 381 FunFam Glucan endo-1,3-beta-glucosidase 3 32 352 - -
Vian4g01929 381 Pfam Glycosyl hydrolases family 17 33 347 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01929 Vian-Chr4 35859010 35860243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01929 16 352 Miscellaneous Gene Families AT3G46570 56.471 3.92e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01929 - - gmx:100795377 611.298