Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01916 ATGAGCTCCAAGCCTGCTTCAGGGAAGGGGAGCAGGCCGGGGAGGCGTCACATGATGAGAGGGTGCCTTTGCCATTTCACTATTAAAAGACTTTACACCAGGCCTCTCCTTGCACTAATCATATATAACCAAAAAAGGCACGTAGATAAATCAGGGGCACCATGTCATGGATTGCTTGACAGGGATGCCGTGGGGACGAGAGCCATGTATGCTCCACGAATTTCGGATGAGTTACGCCAGAAAGTGATGTCTTTGCTTTACGTTGGAATATCTTTGGACAAGATAATACAGCACCATACAGAGGAGATGCAGAAGCAAGGTGGGCCCCAAAACCGTGATGGTTTTCTCACTCGAAATGATGTACGTAACATGGAAAGGACTATTCGTAATTCTTCACATGAGCTACACGAAAATGATGAACACAGTGTAAAGATGTGGGTTCAGAGGCATCAGAAGCATGTTTTCTATTTTCAAGATAACTCAGCTTCAGAACCATTTGTGTTGGGTATACAAACAGATTGGCAGCTGCAACAAATGCTCCGTTATGGAAATAATAGTTTAATTTCGTTTCATTCAGGTTTTGGCTTGAAAAAGCTCAAGTATCCTGTATGTTCTTTACTTGTTTTCAATTCATCCCAAAATGCAATTCCGGTTGCCTGGATCATCACCTCATCTTTTGTTGGTAAATCTATTCATAAGTGGATTGTATTGCTATCTGAAAGATTACGAACGAAGGATCCCAGATGGAGGCCAAATGCTATTTTGTTGGATGATCCATCTTTGCAATTTTCTATCATAAGAGAGGCTTTCCAGTGCCGCGTCCTATTATGTGTCTGGCATGTTTGTCGTACTTTGATTAAAAAACTCATCAAGAAATGCTGCAACTTTGAGGTGCAACGTGAGATGTTTATGCATTTGGGATGGATTCTGTACTGTACAAAATGTGGGCCAAATGCTATGGATTCTGTTGAAGAGTTCATTCAAATTTTTGTTGACCAGTGTGCCTTTATGGACTATTTCAAAAACCATTGGCAAACTAGAATAGATATGTGGATTGATGCAATAAAATCATTCCCGGTGACAACCCCTGAGTCCCATGCTGCAATAGAATCCTATCACCTAACATTAAAATCTATGCTTCTGAAGGAGGATTGTGGTAATTTCTGGCTAAGAGTTGACTGGTTAATCCATGCTTTAACTACCAAATTTCACTCGTTATACTGGTTGGATCAGTACAGTTTAGAGACAGGATATTTTGAGAATGTAAGTGACAATTCTTTCTCCCCTAATGCTTGGAATCATGCTCTTCATATTCCTGATGTTGACGTGATGCTGGATGAACAAAATCTCCATATTGCCAAAGTTTTATCCCAGACTGACAGAAGCTTGGTATATACAGTTTGGAATCTTGGTTCAGATTTTTCACTTTGTGATTGTTCCTGGTCTAGGTTGGGAAACCTCTGTAAACATGTCATCAAAGTGGCAAATTTCTGTAGACATCGGCAGGTTGCAAAACCGTCATTGACTGCTCAAGTTTATAAACAGAATTTGCTCACCCTTCTCCAAAATCCTCCTGATGATCCTTTAGTTCTGGACCATACCGTTCTACATGTGGCCCGTTTGCAACAAGACATTAAGGCCTTGGAAGACTTGTCCAACAGTGGATTGCTCCAGCCTATATCTCTTGATTTAAGTTCTCAAATGGCTGAAAATCCTATGCTTTTTCAACAATCCAGTGACTGGCCCATATTGAAAATAGATTGA 1764 0.407 MSSKPASGKGSRPGRRHMMRGCLCHFTIKRLYTRPLLALIIYNQKRHVDKSGAPCHGLLDRDAVGTRAMYAPRISDELRQKVMSLLYVGISLDKIIQHHTEEMQKQGGPQNRDGFLTRNDVRNMERTIRNSSHELHENDEHSVKMWVQRHQKHVFYFQDNSASEPFVLGIQTDWQLQQMLRYGNNSLISFHSGFGLKKLKYPVCSLLVFNSSQNAIPVAWIITSSFVGKSIHKWIVLLSERLRTKDPRWRPNAILLDDPSLQFSIIREAFQCRVLLCVWHVCRTLIKKLIKKCCNFEVQREMFMHLGWILYCTKCGPNAMDSVEEFIQIFVDQCAFMDYFKNHWQTRIDMWIDAIKSFPVTTPESHAAIESYHLTLKSMLLKEDCGNFWLRVDWLIHALTTKFHSLYWLDQYSLETGYFENVSDNSFSPNAWNHALHIPDVDVMLDEQNLHIAKVLSQTDRSLVYTVWNLGSDFSLCDCSWSRLGNLCKHVIKVANFCRHRQVAKPSLTAQVYKQNLLTLLQNPPDDPLVLDHTVLHVARLQQDIKALEDLSNSGLLQPISLDLSSQMAENPMLFQQSSDWPILKID 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01916 587 ProSiteProfiles Zinc finger SWIM-type profile. 465 499 IPR007527 GO:0008270
Vian4g01916 587 PANTHER ZINC ION BINDING PROTEIN 9 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01916 Vian-Chr4 35725268 35727752 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01916 - - pvu:PHAVU_009G098900g 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01916 4 35725268 35727752 Vian4g01916 4 35725268 35727752 ECH