Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01914 ATGCTGAGGAAGAGGAACAGGTCCGTGCAGAAGGAACAACACCACATGAGTAATCTGACACAGTGTGAAGCCAATTCAGAGCACTATTCGCAGACTCATCATGGCTTGGGACGCAACAACATCAAGCGACACTCAATTTTCAATGTTCCTTGTCTGTTTGTGGGTCTAGGTCCGAAAGGGTTGTTGGATTCTGATTCAGTTAGGAGCCCCACTTCTCCACTTGATGCTAGAGTTCTTTCAAATCTAGGCAACCCTGTTAGGAAGCCAAGATCTTCACCTCATGAAGGGCACCCAAGGAGTTGGGATTGTTGCAAAGTAGGTCTAGGCATTGTGGAGTCTTTGGAAGACTGTTCTAGGTTTTCTGGGAAAATTCTGCAGTCACCAGAGAGCAAGAGGGTTAATCTCAGTCCCCAAATGATGATCAAAGCCCCAAATTGCCAAATCCATAGGGATTTTCTTGAGGGATCCAAGTCTTTGCCCAAAGATTTTTGTAAGGCTCCTTATGCCCCTAAAAATGGATCTGTTACCCACAAGGGTGAATCTGAGTTCACTGTTCTTTTTGAGATTGGAGAAAGTGGCCTTGACCATGAACTGTTTGGGAGAACCAGAACCAGGTCTTGTTCATTGGACTCTTGCAGTCCACTGAAAGAGCTTTCTGGCTTAAACACTTCCTTCTCTGATTCAGACACTGAAAATTTTGCTGTGAAAGATGTCAACATGCAATTGTGCTCTCCTCCTCATTTTATTGGGGGAAGCCAGTACTCAAATACCTTCCCCCCACCTACAAAGTTGAACACAAACCCTCTTTCCATTAGCTCTTCTAATGAATTTATCAACTCTCTGTCTGCTACTGAGATTGAACTCTCTGAGGACTACACATGTGTGATTTCCTACGGCCCTAATCCCAAAACAACTCACATTTTTGGGGATTGCATTCTGGAGACTCATTCCAATGCATTCAAAATCCATGAAGAGAAGGAGAAGGTAGTGAACACTGTTGCTAACAGGTCAGGGAGTCCAAACCCATATCCCTCAAGCGACTTCTTGAGTTTCTGCCACCATTGCAACAAGAAACTAGAAGAGGGGAAGGACATTTATATTTATGGGGGTGAAAAGGCATTCTGCAGTTTAACTTGTCGTGCCATGGAGATCATGATTGATGAGGAGCTAGAGAAATCCAACACCGACCCTCCTTGTGAAAACTCTGCAAAGCCAAAACTTGGTGAGCTACTTTTTGAAACAGGCATTCTCACAGGTTCATAG 1263 0.4426 MLRKRNRSVQKEQHHMSNLTQCEANSEHYSQTHHGLGRNNIKRHSIFNVPCLFVGLGPKGLLDSDSVRSPTSPLDARVLSNLGNPVRKPRSSPHEGHPRSWDCCKVGLGIVESLEDCSRFSGKILQSPESKRVNLSPQMMIKAPNCQIHRDFLEGSKSLPKDFCKAPYAPKNGSVTHKGESEFTVLFEIGESGLDHELFGRTRTRSCSLDSCSPLKELSGLNTSFSDSDTENFAVKDVNMQLCSPPHFIGGSQYSNTFPPPTKLNTNPLSISSSNEFINSLSATEIELSEDYTCVISYGPNPKTTHIFGDCILETHSNAFKIHEEKEKVVNTVANRSGSPNPYPSSDFLSFCHHCNKKLEEGKDIYIYGGEKAFCSLTCRAMEIMIDEELEKSNTDPPCENSAKPKLGELLFETGILTGS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01914 420 Pfam zinc-finger of the FCS-type, C2-C2 341 389 IPR007650 -
Vian4g01914 420 PANTHER FCS-LIKE ZINC FINGER 11 1 417 IPR044585 -
Vian4g01914 420 ProSiteProfiles Zinc finger FLZ-type profile. 347 391 IPR007650 -
Vian4g01914 420 MobiDBLite consensus disorder prediction 66 98 - -
Vian4g01914 420 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01914 Vian-Chr4 35701232 35702755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01914 - - gmx:100779553 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01914 4 35701232 35702755 Vian4g01914 4 35701232 35702755 ECH
Vian7g00370 7 10047943 10049239 Vian4g01914 4 35701232 35702755 PCT