LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian4g01895	ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAATTGAAAGCACAGATTGTAAAGAAGCTTGGAGCGGATAAGTCAAAGCGGTACTTTTATTGCTTGAACAGGTTTTTGAGTCAGAAACTGAGCAAGACTGAGTTTGACAAGTTTTGTTTCCGAGTGCTTGGGAGGGAGAATCTTCCATTGCACAACCATTTTATAAAGTCAATTTTGAAGAATGCCAGCCAAGCCAAGATCCCACCACCAATCCATCCGTCAGGTCCCCAGAAGTTTGGAGAACATGCGTCAGACATATCTCCTGGTAGAGAAGATGGGCACGAACAGAGTGTTGGCAGCTTCCACACTCAGAATCAAAAAGCTCCCGTTTGGTCAAATGGGATTTTGCAGGTATCCCCTAAGGTTAGGCCTGGCATACGTGAGCGGAAGCTGAGAGATAGACCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTTTCTCATCAATCCATGGGTACAGAAGATTGTGGTAGTAAGGTTGATATGGAGAACGGAATTCTTACTCCTTGTGATTATCAGACACCTATGCAGCATCTTCAAGCAGTTGCTGAGCTACCTGAGTATGAAAGAGGAGATGCTGATCGGCGACCTGTAGAAAAGCCAAGAATACATGGGAAAGGGCCAGCTGAAATGTCAGTTGTTGAAGACGGGGAAGAAGTGGATCAGTTAAATCGCTTTGGCCTTTCTAAAAGTCCCTTGATAGCACCACTTGGGATTCCTTACTGCTCAGCAAGTGTAGGAGGAGCCCGCAAGGCATTGCCAGTGAGTAGTGCTGGCTATTTTGATAGTTGTTGTGACAGTGGCAGGTTGTCTGATACAGAAACACTCAGGAGGCGCATGGATCAGATTGCTGCAGTACAAGGTCTTGGAGCCATTTCTATGGAATGTGCAAACATGTTGAATAATATGTTGGATGTCTACTTGAAACGGTTGATCAGGTCTTGTGTTGATTTAGTTAGAGCTAGGTCTACAAATGAGCCGAGAAAGACCCCTGCCCCCAGACAGCAGATGCAGGGTAAGGTCATCAATGGTATGTGGCCAAACAATCATTTACACGTGCAGTGTGATGGTGCGTCAGCAGAAGCTGTGTCAGAACATAGACCACCATGCTTAGTTTCTTTGCATGATTTTAAAGTTGCCATGGAACTAAATCGACAGCAACTCGGAGAAGATTGGCCACTGTGGTTGGAAAAAATATCCATGCAGTCGTTTGAAGAATAA	1260	0.4532	MQPQQSSRIDLGELKAQIVKKLGADKSKRYFYCLNRFLSQKLSKTEFDKFCFRVLGRENLPLHNHFIKSILKNASQAKIPPPIHPSGPQKFGEHASDISPGREDGHEQSVGSFHTQNQKAPVWSNGILQVSPKVRPGIRERKLRDRPSPLGPNGKVDSVSHQSMGTEDCGSKVDMENGILTPCDYQTPMQHLQAVAELPEYERGDADRRPVEKPRIHGKGPAEMSVVEDGEEVDQLNRFGLSKSPLIAPLGIPYCSASVGGARKALPVSSAGYFDSCCDSGRLSDTETLRRRMDQIAAVQGLGAISMECANMLNNMLDVYLKRLIRSCVDLVRARSTNEPRKTPAPRQQMQGKVINGMWPNNHLHVQCDGASAEAVSEHRPPCLVSLHDFKVAMELNRQQLGEDWPLWLEKISMQSFEE	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian4g01895	419	PANTHER	TRANSCRIPTIONAL ADAPTER 1	1	418	IPR024738	GO:0070461
	Vian4g01895	419	Pfam	Transcriptional regulator of RNA polII, SAGA, subunit	4	332	IPR024738	GO:0070461
	Vian4g01895	419	MobiDBLite	consensus disorder prediction	77	112	-	-
	Vian4g01895	419	MobiDBLite	consensus disorder prediction	139	168	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian4g01895	Vian-Chr4	35421649	35422908	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian4g01895	-		-	gmx:100819343	736.873