Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01891 ATGAAATGTTATTTAATGTTAGGAGTGATCGATATGGGCCCACAAACGCCATGGCCCACTTCCACTGCAGTTCCCATCATCTATCATCCATCATCCCAACTCAATCATTCACACTTTTCTTTCTTCTCTCCTTTATCATCTCTTCTCTTCCGCTCTTCTTCATTTCATCATTACACACCAAACATCATGGTTTACTTCGAAGGAGAAAAGGAACACAGAGACCTTATTCCGGGTTTGCCCAACGAAGTTGCAGAGCTATGTCTTCTTCACGTTCCCTACCCTTACCAGGCTCTCTCTCGCTCTGTTTCTTCCACTTGGAACAGAGCAATAACCAATCCTTCCTTTATCTTCTCAAAGAAAACGCTTTCCCATCCGAACCTTTTCGTTCTCGCTTTCCATTCCCAAACCAGAAAGTTTCAGTGGCAGGCGCTTGATCCTTCCTCTGCCCGTTGGTTCCTTCTTCCTCAAATGCCCTCGCCGGAGGACACCTGCATGTTGCCACTTGCCTGCGCCGCCTTGCCACGCCAGGGGAAGCTCTTCGTCATCAACGGCGAAGAAACCCTGACATACCGTGCCGCCACGAACCAGTGGTCGGTGGCTGAGGGACCCGGGGGGAGGGAGTTTGTGGCTGCCGAAGGAGTGGAGGGAAGGATCGTGGCGGTGGGGAGAGCCGGCACCGGCGTGTACGATCCCGAGAGCAACACATGGCAGGAGGGGAGTGAGTTGGGAGGGGAGTTGGAGAGGTACGAGGTTGTGGCGGCAGGGGGAAGGGTATATGTGACGGAGGGGTGGTGGTGGCCGTTCATGTTCCGGCCTAGGGGCTGGGTTTACGAGGTGGAGAAGGACACGTGGCAGGAGATGAGCATAGGAATGAGAGAAGGGTGGAGTGGGGTGGGTGTGACCGTTGGCGGAAGAGTTTTTATGATTGCCGAGTATGGAGATTCTGCTGTGAAGGTGTACGACGAGGAGCATGACACATGGTACCCTGTGGCAGGTGATAGATTTCCAAGAGAAGTTATGAAGAAGCCGTTTTGTGCCACGGGGTTAGATGACAGAATCTACGTGGCATCTTGTGGGTTGAATGTGGCAATAGGGGTTGTTGAGACAGTCTCCAGCATGGAGCAAGATGTCAAAGGTTGTGCTGCTGACGTGTGTGTGACATGGCAGGTGGTGGAGGCTCCTCGCTCATTTAGCGAATTCTCACCTAGTAGCTGCCAAGTGATGTATGCATGA 1233 0.5247 MKCYLMLGVIDMGPQTPWPTSTAVPIIYHPSSQLNHSHFSFFSPLSSLLFRSSSFHHYTPNIMVYFEGEKEHRDLIPGLPNEVAELCLLHVPYPYQALSRSVSSTWNRAITNPSFIFSKKTLSHPNLFVLAFHSQTRKFQWQALDPSSARWFLLPQMPSPEDTCMLPLACAALPRQGKLFVINGEETLTYRAATNQWSVAEGPGGREFVAAEGVEGRIVAVGRAGTGVYDPESNTWQEGSELGGELERYEVVAAGGRVYVTEGWWWPFMFRPRGWVYEVEKDTWQEMSIGMREGWSGVGVTVGGRVFMIAEYGDSAVKVYDEEHDTWYPVAGDRFPREVMKKPFCATGLDDRIYVASCGLNVAIGVVETVSSMEQDVKGCAADVCVTWQVVEAPRSFSEFSPSSCQVMYA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01891 410 Gene3D - 116 392 IPR015915 GO:0005515
Vian4g01891 410 PANTHER OS02G0202900 PROTEIN 72 408 IPR045887 -
Vian4g01891 410 SUPERFAMILY F-box domain 72 155 IPR036047 GO:0005515
Vian4g01891 410 CDD F-box_AtAFR-like 75 115 - -
Vian4g01891 410 SMART fbox_2 79 119 IPR001810 GO:0005515
Vian4g01891 410 SUPERFAMILY Kelch motif 127 357 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01891 Vian-Chr4 35381462 35382694 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01891 - - vra:106761094 726.472