Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01883 ATGGCTCCGAGGCTAGACTTTTCCAATTGGTGGACGAAGGATACACAGAAGGGAACACCGGTAGTGGTGAAAATGGAGAACCCCGCTTTCTCTGTTGTGGAGATCAATGGTGCAGATGCTGCATTCAGGCCAGTTGAGAAAAGCCGTGGCAAGAATGCTAAGCAAGTCACATGGGTGTTGCTTCTCAGGGCTCACCGTGCTGTTGGCTGTGTCACTTGGTTTGCCACTGTGCTTTGGGCGTTGCTGGGGGCCATTAAGAAGAGGTTGATTCATGGACAAGGTGTGGCTATGGAGAGTGAGAGTGACAAGTTGGAAAAAGGCAAGTTTCTGTTTAGAGTCATTAGAGTGTTCCTAGTGACATCCTTGGCAGTTCTGGCCTTTGAGGTTGTTGCTTACCTTCAAGGTTGGCATTTTGGGAACCCCACTTTGCACATTCCTCGTACTTCTGATTTGGAAGGATTGCTCCACTTGGCTTATGTTGCTTGGTTGACGTTTCGTGCTGAGTACATTGCTCCTCCTATTCAGGCACTTTCCAAATTTTGTGTTGTTTTGTTTCTTATCCAGTCTGTGGATCGCATGGTCCTTTGCCTGGGGTGCTTTTGGATCAAATACAGGAAGGTCAAGCCAAAGATTAATGGGGATCCATTCAAGAGTGATGATGTTGAAGGATCTGCAAGCAATTATCCCATGGTTCTGGTTCAAATTCCAATGTGCAATGAGAGGGAGGTGTATGACCAATCCATTTCTGCAGTCTGTGGCATTGATTGGCCAAGGGATCGTTTACTGATTCAAGTACTTGATGATTCTGATGATGAGAGCATACAGTGGTTAATTAAGGAAGAGGTATCTAAATGGAGCCAGAAGGGAATCAATATAATCTATAGGCATCGCTTAATAAGGACTGGATACAAAGCTGGAAATCTTAACTCTGCAATGAGCTGTGACTATGTGAAAGACTACGAGTTTGTTGCTATTTTTGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAGCGAACTGTGCCACATTTCAAGGACAATCCCGAACTAGGTTTGGTCCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAATCTATTGACGCGTCTCCAAAACATAAACTTATGCTTTCATTTTGAGGTAGAACAGCAGGTGAATGGGGTATTTCTCAGTTTTTTTGGTTTCAATGGAACTGCTGGTGTTTGGAGAATCAAGGCCCTAGAAGAATCCGGGGGCTGGCTAGAGAGGACAACTGTAGAAGATATGGACATTGCTGTCCGAGCTCATCTCAATGGTTGGAAATTTGTCTTCCTAAATGATGTAAAGGTACCATGTGAAGTTCCAGAGTCATATGAAGCTTACAGGAAGCAGCAACACCGCTGGCATTCAGGTCCTATGCAACTTTTTAGGCTGTGTCTTCCAGCAATTGTGAAATCTAAGGTGTCTGCATGGAAGAAAGCAAACTTAATCCTGCTATTTTTTCTGTTGAGGAAACTGATCCTTCCCTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCTCTAACCATGTTTGTACCAGAGGCAGAGCTTCCTTTGTGGGTGATCTGCTATGTGCCTGTGTTTATGTCACTTCTTAACATTCTTCCTGCTCCAAAATCTTTTCCTTTCATTGTTCCCTACCTCCTTTTCGAAAACACCATGTCCGTCACCAAATTCAATGCAATGGTATCTGGGCTCTTCCAATTAGGAAGCTCTTATGAATGGGTTGTGACAAAGAAAGCTGGCAGATCATCAGAGTCCGATTTACTGGCTGCTGCAGAAAGGGAAGCCAAGTCAATAGAACAACAAAAGATTCATAGAGGAGCTTCCGACAGTGACCTTATGGAGTCACAAAAGCTTGTAGAGCACAAAGAAGCAGCTCCAACAACTGTTAAGAAAACTAATAAGATATATAAGAAAGAGCTGACTTTGGCATTCCTCCTTCTCACAGCTTCTATCAGGAGTCTGTTATCTGCACAGGGAGTTCACTTCTACTTCCTGCTTTTCCAAGGGGTGACCTTCCTCCTTGTGGGGCTTGATTTGATCGGAGAGCAGATGAGCTAG 2085 0.4384 MAPRLDFSNWWTKDTQKGTPVVVKMENPAFSVVEINGADAAFRPVEKSRGKNAKQVTWVLLLRAHRAVGCVTWFATVLWALLGAIKKRLIHGQGVAMESESDKLEKGKFLFRVIRVFLVTSLAVLAFEVVAYLQGWHFGNPTLHIPRTSDLEGLLHLAYVAWLTFRAEYIAPPIQALSKFCVVLFLIQSVDRMVLCLGCFWIKYRKVKPKINGDPFKSDDVEGSASNYPMVLVQIPMCNEREVYDQSISAVCGIDWPRDRLLIQVLDDSDDESIQWLIKEEVSKWSQKGINIIYRHRLIRTGYKAGNLNSAMSCDYVKDYEFVAIFDADFQPNPDFLKRTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLSFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVPCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIVKSKVSAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLLAAAEREAKSIEQQKIHRGASDSDLMESQKLVEHKEAAPTTVKKTNKIYKKELTLAFLLLTASIRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01883 694 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 159 691 - -
Vian4g01883 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 448 IPR029044 -
Vian4g01883 694 Pfam Glycosyl transferase family group 2 323 529 IPR001173 -
Vian4g01883 694 FunFam probable xyloglucan glycosyltransferase 5 222 447 - -
Vian4g01883 694 Coils Coil 590 610 - -
Vian4g01883 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 509 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01883 Vian-Chr4 35320297 35323262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01883 1 694 Miscellaneous Gene Families AT4G31590 79.340 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01883 - - gmx:100790397 1338.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01883 4 35320297 35323262 Vian4g01883 4 35320297 35323262 ECH