Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01882 ATGGAGATCCGCGCCGATGCAGAAACCAGCTCCTTCTCAAGTTTGTTCGCGGCTGTGGCATATGGGTTTGCCTCCATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCATATTCAATGACTCTTCTCACTTTGCAGCAATTGGCTACTTCTTTGCTTATTCATGTTGGTAGACGTGCGGGATTCACAAAGGCGAGAGGACTGGAAATGACAACGGCCAAGCGACTTCTCCCGCTTTCAATTTTCTATAATGCCAATGTTGCTTTTGCTTTGGCCAGTTTGAAAGGAGTCAATATCCCAATGTATATTGCGATCAAGAGGCTTACGCCACTTGCTGTACTTATTGCTGGGTACTTCTCGGGAAAGGGGAGACCTACATCTCAGGTGGCTCTTTCAGTTATATTGATTGCTGCTGGAGTTCTCATTGCTGCCCTCGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCTTTTGTTTCCGTTTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAGATCTGGTGCTGAGGATGGACTTTCATCCTTGGAAATCATGTTTTATAACAGTTTTTTATCTCTTCCATTTTTGATGTTTCTCATCATAGCCACTGGGGAATTCCCAAAGTCTTTATCTTTATTATTTGCACAGAGTTATTCTTTTTCATTTTTGATGGTTCTTATTCTTTCATTGGTGATGGGCATTGTTCTCAACTTCACGATGTTCTTGTGTACAATTGTTAATTCAGCCTTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGTTTCCACGACCCTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGCTTTGAATGTGTCTGGATTGGTTATCAATACAGCTGGCGGTGTGTGGTATTCATTTGCCAAATATCAGCAGAAAAGAAGTAAGTCGACGAAGCTTGTACCTGATGAGGAAGCTCATCGTAAATAG 972 0.4239 MEIRADAETSSFSSLFAAVAYGFASMAMVFINKAVLMQYAYSMTLLTLQQLATSLLIHVGRRAGFTKARGLEMTTAKRLLPLSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGYFSGKGRPTSQVALSVILIAAGVLIAALGDFSFDLFGYSMAFVSVFFQTMYLVLVERSGAEDGLSSLEIMFYNSFLSLPFLMFLIIATGEFPKSLSLLFAQSYSFSFLMVLILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVVSTTLGFFLLGGVQVHALNVSGLVINTAGGVWYSFAKYQQKRSKSTKLVPDEEAHRK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01882 323 PANTHER SOLUTE CARRIER FAMILY 35 15 307 - -
Vian4g01882 323 Pfam Triose-phosphate Transporter family 23 300 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01882 Vian-Chr4 35310222 35312914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01882 19 322 Lipid Metabolism Gene Families AT5G19980 26.087 9.80e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01882 K15281 - gmx:100777622 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01882 4 35310222 35312914 Vian4g01882 4 35310222 35312914 ECH