Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01879 ATGGCAGGGTTAAATTTTGAGGCCACATATACTGACAACCATGATATTCTGAAGATACTTGAAGCTGAAGGTGTTGAGTTCCTTTTATCTTCTGAAGGAAAGGTACCTGTGTCAGAATGCAATGGGAAAGTCATCTGCCTATTTTTCAGTGCAAACTGGTGCAGGCCTTGCAGAGCTTTCACTCCCCATCTTCTTGAACTTTATGAAACACTGAGAAAGAGGGGAAAGAATCTGGAGATCATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAGCACTTCAAGAGCATGCCATGGCTAGCTGTCCCATTTGATGTAACTTTGCACAGAAGACTGATTGACAGATACAGAGTTGATCGAATTCCATCATTCATTCCATTATGTTCAGATGCCATAACTGTTGAAGAAGACTTGATTGGCTGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACTAGGAAGAGACACGAGGAACTGAAAGCCATGGATAAAAGGAAGCGTGAGGAAGCAAACTCGGAAGAATTACTGGGACATGAAGAACGCCACTTTCTCATCTCTGGAGATGATAGAAAGGTGCCCATATCTGAAGTAGTTGGTAAAACCATAGGCTTGTATTTTTGTGCCTACTGGTCTCCTCCTTGCTCTGCCTTCACTGTCCAACTTAGAGATGCATACAACAAACTCAAGGCTGCAAAAGGAGACTGCTTTGAGATTGTTTTAATATCAACAGATAGGGACCTTGAAGAATTCAATGTCAACAAAAGTAGTATGCCATGGCTTGCTGTTCCATATGAGGACAGGACAAGGCATGATCTTAGAAGAATCTTCAATATAAAGGGCATTCCTGCTTTGGTTTTCATTGGAGCTGATGGCAAAGTAATCAGTGTGAATGGCAAGTTTATGGTCTCTTCATATGGGGCAGAAGCTTTTCCCTTTACCGAATCACGGATAAGAGACCTAGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTCTGCCAAAGCAGGTTGAGGATGTCAAGCATGAACATGTGCTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAGAAAGCAAGGGAAGTTCTGGACATTTTCTTGTGATGTTTGTGACTATGACCTGCATCCAAGTTGTCTAGAAAAGGCCAACTAG 1164 0.4235 MAGLNFEATYTDNHDILKILEAEGVEFLLSSEGKVPVSECNGKVICLFFSANWCRPCRAFTPHLLELYETLRKRGKNLEIIFISFDRDEDGFKEHFKSMPWLAVPFDVTLHRRLIDRYRVDRIPSFIPLCSDAITVEEDLIGCIEDYGADAFPFTRKRHEELKAMDKRKREEANSEELLGHEERHFLISGDDRKVPISEVVGKTIGLYFCAYWSPPCSAFTVQLRDAYNKLKAAKGDCFEIVLISTDRDLEEFNVNKSSMPWLAVPYEDRTRHDLRRIFNIKGIPALVFIGADGKVISVNGKFMVSSYGAEAFPFTESRIRDLEAALRKEGEALPKQVEDVKHEHVLKLDMAKAYVCDSCRKQGKFWTFSCDVCDYDLHPSCLEKAN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01879 387 Gene3D Glutaredoxin 20 158 - -
Vian4g01879 387 PANTHER THIOREDOXIN 7 335 - -
Vian4g01879 387 CDD TryX_like_TryX_NRX 186 315 IPR045870 GO:0004791
Vian4g01879 387 Gene3D Glutaredoxin 179 317 - -
Vian4g01879 387 Coils Coil 156 176 - -
Vian4g01879 387 ProSiteProfiles Thioredoxin domain profile. 177 325 IPR013766 -
Vian4g01879 387 SUPERFAMILY Thioredoxin-like 187 298 IPR036249 -
Vian4g01879 387 ProSiteProfiles Thioredoxin domain profile. 16 170 IPR013766 -
Vian4g01879 387 Pfam C1 domain 342 382 IPR004146 -
Vian4g01879 387 SUPERFAMILY Thioredoxin-like 31 129 IPR036249 -
Vian4g01879 387 SUPERFAMILY Cysteine-rich domain 335 383 IPR046349 -
Vian4g01879 387 Pfam Thioredoxin-like 42 127 IPR012336 -
Vian4g01879 387 Pfam Thioredoxin-like 202 296 IPR012336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01879 Vian-Chr4 35280311 35281982 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01879 K17609 - gmx:100778160 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01879 4 35280311 35281982 Vian4g01879 4 35280311 35281982 ECH