Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01878 ATGGCGCGAGTGTGGGTGAGCTCCACATTCCCGCGCGCACTTCATTTCGCGATTCAGCGCCACTCTAACTCCTCCCTCGTTATCTTCCCTGTAAACTCTCTTTACTCTAAGATGGAACGATCGGTGACTGGTAGTGTTAGGGCTTTTGAATCCTCTTCTGCTAAACCTATGAGTTGGTGCGATGGCGTTCAAGAACCACGGGTTCTCGTCGCGCCGGATCCTGGCACCGGTGGAAATGGTCCGGGACAGATGATACTGCTCCGCCATCCCAAATCTGGAAATGCAACGCAGTATCTGTTTGCAAATGGAATGCTTCAAGAACTTCAGTGGTTTAAGAACTTGTACGGGTCTTGGTTTTTGGGAGATTATATAACTGAAGATGGTCGGTTGTATTTATCCACACCAATTGATCCTGTTTTCATCATGTTGCCTATATTTGAGGAGGCTAGAATGAAGAAAGGGGATGATCTTGGCAGGTTCAGGCGATTGGACGAGATATTATTTATTGATGGCTATCCAGGATATATGCAGTTAATGTCTGTTGTGGAGAACTCTATGCAAGTTGTTTCTGAAATCAAAGAAGTTGGATCCTCAAAATTCTTCAGACTTGATGACTCAAAGGTTCTACGTTGGCTGTGCTATAAGGTTTGTCAACTAAAACAGACACTACCCAATTTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTGATTGATGCCGTCTCTATATTAGGAGAGTATTTGAAGGAAAAGCCTTGGCTGGAGCTTTTGTGTAACCATCTAAAGTTAAATATACTTGAGGTTACTGGAAAAGTACAAGTATATGCTGAAGGAAGTAACCCAGGTTTATGTAACGAATTACAGGAACAACGGAGTGAAGATAAGAAGGCCACAACTGTAAAGAAAGGTAGACAAGCGAAGAAGGTAAAATTGGAGACAGAATCACACAACATCAAAGATATGTTTACGAGGGCCTCCCGAAAGAAAAGCTAA 999 0.4284 MARVWVSSTFPRALHFAIQRHSNSSLVIFPVNSLYSKMERSVTGSVRAFESSSAKPMSWCDGVQEPRVLVAPDPGTGGNGPGQMILLRHPKSGNATQYLFANGMLQELQWFKNLYGSWFLGDYITEDGRLYLSTPIDPVFIMLPIFEEARMKKGDDLGRFRRLDEILFIDGYPGYMQLMSVVENSMQVVSEIKEVGSSKFFRLDDSKVLRWLCYKVCQLKQTLPNLDKNYAVQSEKDTLIDAVSILGEYLKEKPWLELLCNHLKLNILEVTGKVQVYAEGSNPGLCNELQEQRSEDKKATTVKKGRQAKKVKLETESHNIKDMFTRASRKKS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01878 332 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 140 226 IPR019024 -
Vian4g01878 332 Gene3D - 67 135 - -
Vian4g01878 332 FunFam Ribonuclease H2 subunit B 136 264 - -
Vian4g01878 332 Gene3D - 136 264 - -
Vian4g01878 332 MobiDBLite consensus disorder prediction 290 312 - -
Vian4g01878 332 CDD RNase_H2-B 68 221 IPR040456 GO:0032299
Vian4g01878 332 PANTHER RIBONUCLEASE H2 SUBUNIT B 59 330 IPR040456 GO:0032299
Vian4g01878 332 FunFam Ribonuclease H2 subunit B 65 135 - -
Vian4g01878 332 Pfam Ydr279p protein triple barrel domain 84 137 IPR041195 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01878 K10744 - gmx:100792495 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01878 4 35267743 35272674 Vian4g01878 4 35267743 35272674 ECH