Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01875 ATGGTTTTCTGGGTGTTTGGCTACGGTTCACTGGTGTGGAACCCGGGGTTTGATTACGATGATAAGATTGTTGGTTTCATTAAGGATTACAGACGCGTGTTCGATTTAGCGTGCATTGATCACAGGGGAACCCCAGAAAGCCCAGCAAGAACTTGCACGTTGGAGGAGAAAGAAGGAGCTATTTGCTGGGGAACTGCCTATTGTGTTCGGGGAGGCCCTGAAAGGGAAAAAATGGCCATGCAGTATTTGGAGCGACGGGAATGTGAATATGACAGAAAAACTATTGTAACCTTCTTCAAGGAAGGAGAATCACAGCACCCTGCTTTGACTGACGTAATAGTATTTACATCAACTCCAGACAAAGTGAACAACAAATACTACCTGGGACCTGCCCCACTGGAAGACATGGCTAGGCAAATAGCAACTGCGTATGGTCCTTGCGGAAACAACAGGGACTATCTTTTCCTTCTAGAAAAGGCTATGCATGATATTGGCCATGAGGACAACTTAGTGATAGAGCTTGCGAATGAAGTGAGGAAAGTACTTGGAGTGGGAAACATGCTAACAAATGTTGCAACAGCTCAACTTCCACACCCTCCTCATGTATCCATACCTACACGTCAACTGCAGCCACTGCCAGAACCTATTGTTTTGGATGGGTGA 663 0.46 MVFWVFGYGSLVWNPGFDYDDKIVGFIKDYRRVFDLACIDHRGTPESPARTCTLEEKEGAICWGTAYCVRGGPEREKMAMQYLERRECEYDRKTIVTFFKEGESQHPALTDVIVFTSTPDKVNNKYYLGPAPLEDMARQIATAYGPCGNNRDYLFLLEKAMHDIGHEDNLVIELANEVRKVLGVGNMLTNVATAQLPHPPHVSIPTRQLQPLPEPIVLDG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01875 220 FunFam Gamma-glutamylcyclotransferase 2 185 - -
Vian4g01875 220 Gene3D - 2 180 - -
Vian4g01875 220 CDD GGCT_like 5 110 IPR013024 -
Vian4g01875 220 ProSitePatterns Glycosyl hydrolases family 5 signature. 170 179 IPR018087 GO:0004553|GO:0005975
Vian4g01875 220 Pfam ChaC-like protein 4 180 IPR006840 GO:0006751|GO:0061928
Vian4g01875 220 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 185 IPR006840 GO:0006751|GO:0061928
Vian4g01875 220 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 2 109 IPR036568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01875 Vian-Chr4 35248963 35250581 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01875 K22596 - gmx:100793027 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01875 4 35248963 35250581 Vian4g01875 4 35248963 35250581 ECH