Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01873 ATGGCTGACCAACCAAGAACTGCAGGTCCCTACTATGGTTCCTCCCATGGAACCTCCTATGGACCACCCTATGGAAGTACCAATGAGTCCAACACCAGCAGCTACAACAACTCTATTTCACGTCAAACAGTCAAGTTCATAACTGCTGTTACTATTGGCATCTCACTCTTGCTCTTGGCTGGGTTGATCTTCACAGGTACTGTCATAGGGTTGATAGTTGCAACTCCTCTTCTTGTGATCTTCAGCCCCATCCTTGTCCCAGCAGCTTTTGTGTTGTTTCTAGTTACTTCCGGATTTTTGTTCTCTGGCAGCTGTGGTGTGGCTGCCATTGCTGTTTTGTCTTGGATTTACAACTACGTGTCTGGGAACCAGCCTGCAGGTTCTGACACCCTTGACTATGCAAAAGGGTATCTTGCTGATAAGGCTAGGGATGTGAAGGAGAGGGCAAAAGATTATGGAAGCTATGCTCAGGGTAAAATTCAGGAGGCTACACAGGGAGCTTATTAA 507 0.4675 MADQPRTAGPYYGSSHGTSYGPPYGSTNESNTSSYNNSISRQTVKFITAVTIGISLLLLAGLIFTGTVIGLIVATPLLVIFSPILVPAAFVLFLVTSGFLFSGSCGVAAIAVLSWIYNYVSGNQPAGSDTLDYAKGYLADKARDVKERAKDYGSYAQGKIQEATQGAY 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01873 168 ProSitePatterns Oleosins signature. 66 88 IPR000136 GO:0012511|GO:0016020
Vian4g01873 168 Pfam Oleosin 42 153 IPR000136 GO:0012511|GO:0016020
Vian4g01873 168 PANTHER OLEOSIN 33 162 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01873 Vian-Chr4 35229062 35229568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01873 1 145 Lipid Metabolism Gene Families AT2G25890 48.387 1.85e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01873 - - pvu:PHAVU_009G103600g 271.166