Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01867 ATGGCGCCCACGAAGCTCTTCTTCTTTGCGTTTTCAGTAGCCCTAATTTTCGCCATCGTCGGGGCCGAGGCTGATGTTTCCGTCGAAGGAAGCGTAGCAGAGCCTGATTCCTCTGCCTTCAAGATCCAATTAGATCAACTCAATTCTAAGATCCGAATTCTCGAATCTGAAATCAGAGAAAAGTCAGAAGAAGTGAAGAGGAAGGACGAAATTGTGGCCGGAAAAGAAAAAATTATTCAAGATAAATTGGTCACCATACAGTCCCTGCAGAATGATATTGCTTCTCTCCAGAAAAAAGGGTCATTGGATGCTGAAGAGCAAGTCGGAAAGGCTCATGCACGGGCTGTTGAACTACAGAATCAGGTGGACAAGCTTAAAGGGGAACTAGAAACACAAAACAGGGAGAAAGGGAACTGGGAAACTCGAGTGCTTGGGTTAGAGAAAAAAGTTAATGACTTGAACTCAAAATTAGAAGATCTTCAAAAGATAAACCAGGAGCAGAGGACACAGATTCAGAAAACGGAGCGTGCTCTTAAAGTTACCGAGGAAGAGATGGTGAAGGCTAAGTTTGAGGCAGCTGTCATAGAAGCAGAGTTGAGTTCGACACGTGGTGCTTGGCTTCCACCTTGGCTTGCTGTACACTATCTTCATAGTAAGTCTTGTGTTGAGACTCAATGGAACAAACATGGGAAACCTGTTTGGGAAAAGGTTGCTCAAAAGGCCCTAGATAAAAAGGCACAAGCTGGAAAGTGGGCTGAACCTCATGTGGAAACCATTAAAACTAAATGGGTCCCTGCTGTAAAAGAACAGTGGTCTGTGGTGAAAACAAGTGCTGAACCGCATTTGCAATTATTGACCACAAAAACTGTTGAAGGTTATGAGGCTACCAGGAAGACAATTTCTCCCCATTTAAGCAAGGCAAAAGAATTTGTTCATCCTTATTATCAGGAAGCTAGAAAGTTCAGCAAGCCATACATTGATCAGATTGCTGTTGCAGCTAAACCTCATGTTGATAAAGTACAAGTGGTTTTGAAGCCCTACACAAATAAAGTTGTTCATAGTTATGGGAAATTTTTGGAATCAGCTACTACATATCATCGCCAGGTCCAAGCCACTGTCCAAGAGACACTGAAAAAGCATGAGCTCACCAGACCTCTTGCTACTAAAGAGTTAGAATGGTTTGCGGCCTCGGCTCTTTTGGCTCTACCCATTATTTTTGTGGCTAGAGTGTTTTCAGCTGTGTTCTGCGATAAAAAAGTGAATAAACCTTCTCGAAGTGGAAATAACCATGCACGACGCAAAGCTAAACGAAGCCATCCAGACAAGCACACATCATGA 1338 0.4312 MAPTKLFFFAFSVALIFAIVGAEADVSVEGSVAEPDSSAFKIQLDQLNSKIRILESEIREKSEEVKRKDEIVAGKEKIIQDKLVTIQSLQNDIASLQKKGSLDAEEQVGKAHARAVELQNQVDKLKGELETQNREKGNWETRVLGLEKKVNDLNSKLEDLQKINQEQRTQIQKTERALKVTEEEMVKAKFEAAVIEAELSSTRGAWLPPWLAVHYLHSKSCVETQWNKHGKPVWEKVAQKALDKKAQAGKWAEPHVETIKTKWVPAVKEQWSVVKTSAEPHLQLLTTKTVEGYEATRKTISPHLSKAKEFVHPYYQEARKFSKPYIDQIAVAAKPHVDKVQVVLKPYTNKVVHSYGKFLESATTYHRQVQATVQETLKKHELTRPLATKELEWFAASALLALPIIFVARVFSAVFCDKKVNKPSRSGNNHARRKAKRSHPDKHTS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01867 445 Coils Coil 79 99 - -
Vian4g01867 445 PANTHER OS08G0519400 PROTEIN 29 437 - -
Vian4g01867 445 MobiDBLite consensus disorder prediction 422 445 - -
Vian4g01867 445 MobiDBLite consensus disorder prediction 425 445 - -
Vian4g01867 445 Gene3D - 39 212 - -
Vian4g01867 445 Gene3D Apolipoprotein 217 368 - -
Vian4g01867 445 Coils Coil 108 198 - -
Vian4g01867 445 Coils Coil 37 71 - -
Vian4g01867 445 SUPERFAMILY Apolipoprotein A-I 204 377 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01867 - - var:108321842 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01867 4 35164517 35171786 Vian4g01867 4 35164517 35171786 ECH