Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01853 ATGGTTCTTCTTCTGCACCTTCCAAGGTTCCCTCTCTACTTGATTACTTCATCTCAATCCCTTCCTCTCCGAGCCCTCTCAACTTCCTCCAAAACCACCCTCTTACGCCCACCCAAAGCCACGCTCACCACCTCAGAACCCGTGACCGTAACAAACCCTTCCGCAACAGAACTATCCCTCGAGAAGCTCTTCGTTCCGCCGGAGACCAACGTGTCTCTCGACACCGCGAGAGTGTTGAACGGTTCCAACATTCTTCTCAGCAACTACGCCAACGACGCTCTGATATCGCAGGCCGAATTCGTGAAAAGCAGTGTGAAAACCGAAGACTGCCCCTCCGATGGCCTCCCTGAATTTGCTCTCGTTGGCCGCTCCAATGTCGGAAAATCCTCCCTCCTCAACTCTCTCGTGCGCCGCAAGAAGCTCGCCTTAACTTCCAAGAAACCTGGCAAAACGCAATGCATTAACCATTTTCGGATTAATGATAGCTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCCCCGCATGAACTTAGAATGGACTGGGGAAAATTCACCAAGGACTATTTCCTTAACCGATCAACATTAGTTTCAGTATTCCTTCTAATAGATGCTAGCATTCCTGCTAAACAAATCGATCTTGACTATGCCAGTTGGTTGGGTCAGAATCAGATACCAATGACAATAATCTTTACCAAATGTGACAAGCGGAAGAAGAAAAAAAACGGAGGCAAAAGACCAGAGGAAAATGTTGATGATTTTCAGGACTTGATTCGTGGTTTCTTCCAATCAGTGCCTCCATGGATCATGACCAGCAGTGTCACCCATCAGGGTCGTGATGAAATACTTCTCCATATGGCGCAGCTACGGAACTATTGGCTTAAGCACTAA 897 0.4783 MVLLLHLPRFPLYLITSSQSLPLRALSTSSKTTLLRPPKATLTTSEPVTVTNPSATELSLEKLFVPPETNVSLDTARVLNGSNILLSNYANDALISQAEFVKSSVKTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYASAPHELRMDWGKFTKDYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENVDDFQDLIRGFFQSVPPWIMTSSVTHQGRDEILLHMAQLRNYWLKH 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01853 298 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 29 298 - -
Vian4g01853 298 NCBIfam ribosome biogenesis GTP-binding protein YihA/YsxC 98 286 IPR019987 GO:0005525
Vian4g01853 298 CDD YihA_EngB 117 291 IPR030393 GO:0005525
Vian4g01853 298 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 114 294 IPR030393 GO:0005525
Vian4g01853 298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 294 IPR027417 -
Vian4g01853 298 Hamap Probable GTP-binding protein EngB [engB]. 103 292 IPR019987 GO:0005525
Vian4g01853 298 Pfam 50S ribosome-binding GTPase 118 235 IPR006073 GO:0005525
Vian4g01853 298 Gene3D - 89 294 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01853 Vian-Chr4 34908803 34911620 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01853 K03978 - gmx:100800610 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01853 4 34908803 34911620 Vian4g01853 4 34908803 34911620 ECH