Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01832 ATGGCATCTATTCGAAGAACTTTGTCGCCTGTTGCTAGGGCTGGAACTGCAACAAATGTTGAAGTCTGTTCAGTAGGTTCTCCTTTGTCTAAGTCGATGTCAAGTCCTCAGAACTGGTCACCTTCAGTTGGATTGGACTACCGTGCTTTTGTGTTTGGTGCTTTCTCCCCAAGGTCATTCAGGGGTTTTGAGAGATCAAAACCCAGGGGCCAGCTCTGGAGGAAGGTACTATTCCATTTTTTCATCTGTTTCATGGTTGGTGTTTCTGTTGGACTCATTCCACTTGCATCAGTACACATGTCAATGAATCTGATGCCAAAACATCGAACCTTCTCATTTGAGGTGATATCTGCAATGGGAAATTTCCAGCAGCTTGAAAATGCAGCAATAAATATAACACCATCAATCAACGAGGCTGTGAATTTTAATGCTTCTTTGTATGTAACTGTGAAAGAACCAGGTCTAATAGATGGCGTGGCATATAATATATCAAATAGCCAAATCCGTGAACATTCACATGTGGAGTCTCAGAAGCTTCTCATCATTGTGACTTCAACATACAATCATCTATTTCAAGCACATTACTTGCATCGCTTGTCACAAACATTAAAACTGGTCTCACCTCCCTTTTTGTGGATCGTTGTTGAGATGACTTCCCAATCTGAAGAAACTGCTGACATCTTAAGGAGTAGTGGGATTATGTACAGGCATCTCACTTGTAAAACAAATATAACAAACCCAGGCCATAGGAGCATTCTTCAAAGAAATATTGTAATGGCTCACATCGAAACTCATCGTCTTGATGGAATTGTTTACTTTGCAGATGATGATAACATCTATTCATTGGACCTCTTTCAGCGAATGAGAGAAATAAGGCGATTTGGGACATGGACTGTAGCAAGATTATCAGGGGATAAAAGTAGAATTGTCTTGCAAGGGCCCATTTGTAATGGAAATCGAGTAATTGGATGGCATTCGAATGAACCAAATGGGAAATCCAAAAGATTTCATGCTGAAATGTCGGGTTTTGCCTTCAATAGTACGATACTCTGGGATCCAAAGAAGTGGCATCGCCCTACTCTAGAACCTATCAGGCAACTTGACTCGGTCAAGGACAGTTTGAGGGTCAGCACATTGATTGAGCAGCTGGTTGAAGATGAAAGTCAAATGGAGGGCTTGATGGACAACTGCTCGAGAGTTATGGTCTGGCATATCGATCTTGAATCATCTTATTCGTCCTATCCGCAAAAATGGATTGTAAAGAACAACCTAGATGCCACTTTTCAGCTTCCACTTGTGTGA 1302 0.414 MASIRRTLSPVARAGTATNVEVCSVGSPLSKSMSSPQNWSPSVGLDYRAFVFGAFSPRSFRGFERSKPRGQLWRKVLFHFFICFMVGVSVGLIPLASVHMSMNLMPKHRTFSFEVISAMGNFQQLENAAINITPSINEAVNFNASLYVTVKEPGLIDGVAYNISNSQIREHSHVESQKLLIIVTSTYNHLFQAHYLHRLSQTLKLVSPPFLWIVVEMTSQSEETADILRSSGIMYRHLTCKTNITNPGHRSILQRNIVMAHIETHRLDGIVYFADDDNIYSLDLFQRMREIRRFGTWTVARLSGDKSRIVLQGPICNGNRVIGWHSNEPNGKSKRFHAEMSGFAFNSTILWDPKKWHRPTLEPIRQLDSVKDSLRVSTLIEQLVEDESQMEGLMDNCSRVMVWHIDLESSYSSYPQKWIVKNNLDATFQLPLV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01832 433 Pfam Glycosyltransferase family 43 199 408 IPR005027 GO:0015018|GO:0016020
Vian4g01832 433 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 71 427 IPR005027 GO:0015018|GO:0016020
Vian4g01832 433 CDD GlcAT-I 178 408 IPR005027 GO:0015018|GO:0016020
Vian4g01832 433 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 179 426 IPR029044 -
Vian4g01832 433 SUPERFAMILY Nucleotide-diphospho-sugar transferases 179 424 IPR029044 -
Vian4g01832 433 FunFam Glycosyltransferases 179 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01832 Vian-Chr4 34645337 34648814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01832 1 426 Glycosyltransferase AT1G27600 43.488 1.22e-117 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01832 K20869 - gmx:100808765 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01832 4 34645337 34648814 Vian4g01832 4 34645337 34648814 ECH