Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01830 ATGGAGGAAGCAAAAGGACTAGTGAAACACATAGTGCTCGCAAAGTTCCAGGACGATGTCACTACCGAGAAGATTGAAGAACTCATCAATGCCTTTGCCAACCTGGTCAATCTTATTCCACCCATGAAATCCTTCCATTGGGGCAAAGATGTGAGTGTTGAAAATCTGCATCAAGGCTTCACTCATGTGTTTGAATCAACCTTTGAGAGTACAGAAGCCATTGCTGAGTATTTAGATCATCCTGCTCATGTTGAGTTTGGAAATTTGCTACTTTCCAATCTGGACAAAATACTTGTCATTGACTATAAACCTACCAGTTAA 321 0.4081 MEEAKGLVKHIVLAKFQDDVTTEKIEELINAFANLVNLIPPMKSFHWGKDVSVENLHQGFTHVFESTFESTEAIAEYLDHPAHVEFGNLLLSNLDKILVIDYKPTS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01830 106 PANTHER - 6 105 IPR044662 -
Vian4g01830 106 SMART Dabb_2 8 104 IPR013097 -
Vian4g01830 106 SUPERFAMILY Dimeric alpha+beta barrel 8 104 IPR011008 -
Vian4g01830 106 ProSiteProfiles Stress-response A/B barrel domain profile. 8 102 IPR013097 -
Vian4g01830 106 Gene3D - 1 106 - -
Vian4g01830 106 Pfam Stress responsive A/B Barrel Domain 8 103 IPR013097 -
Vian4g01830 106 FunFam Stress-response A/B barrel domain-containing protein HS1 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01830 Vian-Chr4 34635890 34636728 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01830 - - gmx:100791148 179.489