Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01815 ATGTGTGATTTTATTGAGCAGCCACTCAAGAAAATTCTGCCTGGACTCCCTTTACTAATTGATGTTCAAAAGACTATGACAGACGCTGCAGCTAAATTGCTTGAAGCTTTTGTAGATTCATTCTTTGAATTTGTTGATCAGCCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTGGGTGAAGCCATACTTGTTACCAGCATCCAAGGATCAATTCCTGATGATTTTCCAGAGGGTGTTTACATTAGAAATGGACCAAATCCAGTTTTTGGAGGATTAAAATCAACAAATTCTATCTTTGGGAGGTCAAGTCACATTTGGGTGGAAGGAGAGGGGATGCTCCACGCAATTTACTTTAAAAGGTCAAGTCAAGGGAGCTGGAAGGTTCTTTACAACAACAAGCACGTTGAAACCGATACATACAAGATAGAAAAGCAACTCAGCAAACCATCGTTTCTACCGGCCATTGAAGGCGATTCACTCGCCATTTTGTCTGCTTATCTGCTAAACTGGTTGCGATTTGGCAAAGTAAACAAGTATATCAGCAACACCAATGTGTTTGAGCATTCTGGGAAGTTTTACTCGGTTGCCGAAAATCACATTCCACAAGAGATTGATATCTTCACACTAAAAACTGTAAGAAATTGGAATGTCAATGAAGCCTGGGATCGTCCTTTTACCAGTCATCCAAAGAAGGCTCCAGGTACGGGTGAGCTAGTAACGTTAGGGGTTTCACCAACCAAACCTTTTGCCGTTGCTGGAATTATTTCTGCTGATGGAGAGAAATTGGTTCAAAAAGTTGACCTCCAACTAAATAGGTGCACTCTTTGTCATGAAATTGGTGTTACAAAGAGGTACATTGTGATCATGGATTTTCCTCTAACCGTTGATCTAAACAGACTTCTTAGAGGAGGCCAATTAATAAAGTATAATAAGGAGGAATACGCAAGGATTGGGATACTGCCACGCTATGGTGATGCCAACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACTTTCCACATTATCAACTCTTATGAGGAGGGACACGAGGCAAGTTGCGTAGTTGTAGTGAGGGGTTGCTCATCTCTGGATTCGCTAATTCCTGGACCTAACCTAAGTTTGAAGGAATACGAGGGGTTATCACGCTGTCACGAGTGGCGATTGAATATGCACTCAGGAGAAGTTAAGGAGAAAGATATCTGTGGAGGCAAAGTAGTTTATATGGATTTTCCTGTGATCAATGGAAACTTCATAGGAATGAGGAATAGATATGCATATACCCAATTAGTCGATCCAATTGCAAGCTCTAATCAAGGAGCGCCAAAATATGGAGGTTTAGCAAAGCTCTACTTTGAAGAATCATGCAAGGGAGACAAAGAGAAAGCAGAAGAGGCTGTAAGAGTGGAGTACCATATGTTTGAGAAGAAGACATTTTGCAGTGGGGCTGCCTTTGTCCCCATAGAAGGGGGTCTTGAAGAAGATGACGGTTGGATCATAGCTTTTGTTCACAATGAAGATACTAACATATCTGAAGTTCATATAATCGACGCAAAGAAGTTTTCTGGTGAAGTGGTTACTAAAATTACAATGCCTCGCAGAGTACCATATGGGTTTCATGGAGCTTTCATGCAAATTTCTTTTCAGGCACAGGAGCACAACAGTGTTTATCACCAACAAACGCCTTAA 1701 0.4145 MCDFIEQPLKKILPGLPLLIDVQKTMTDAAAKLLEAFVDSFFEFVDQPLLPSQSNFAPVEELGEAILVTSIQGSIPDDFPEGVYIRNGPNPVFGGLKSTNSIFGRSSHIWVEGEGMLHAIYFKRSSQGSWKVLYNNKHVETDTYKIEKQLSKPSFLPAIEGDSLAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTVRNWNVNEAWDRPFTSHPKKAPGTGELVTLGVSPTKPFAVAGIISADGEKLVQKVDLQLNRCTLCHEIGVTKRYIVIMDFPLTVDLNRLLRGGQLIKYNKEEYARIGILPRYGDANSIKWFEVEPNCTFHIINSYEEGHEASCVVVVRGCSSLDSLIPGPNLSLKEYEGLSRCHEWRLNMHSGEVKEKDICGGKVVYMDFPVINGNFIGMRNRYAYTQLVDPIASSNQGAPKYGGLAKLYFEESCKGDKEKAEEAVRVEYHMFEKKTFCSGAAFVPIEGGLEEDDGWIIAFVHNEDTNISEVHIIDAKKFSGEVVTKITMPRRVPYGFHGAFMQISFQAQEHNSVYHQQTP 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01815 566 Pfam Retinal pigment epithelial membrane protein 57 548 IPR004294 GO:0016702
Vian4g01815 566 PANTHER BETA-CAROTENE DIOXYGENASE 64 548 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01815 Vian-Chr4 34457990 34461253 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01815 - - vun:114164271 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01815 4 34457990 34461253 Vian4g01815 4 34457990 34461253 ECH