Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01810 ATGGCTTTCACAACCATGCCTTTCACAACCATGCCTTCTTCACTCACAAACTCCACTTCTTCCCCAACTATGCTTCTTCCTCCCATCTCTCATCATAACAATCATATTTTACCTCCAAATAAACTCATCGTCAATAAACCCAAACGCAAACTCCTACACTTAACCGTTGCAAATGTTGCAAGTCCTTCATTACCCATGATTACCCCACCAACACCGGAGGAACAACGCTCAGGAACCACCGCCGGCCGCCACCACCACCACCATGTTGCATGGACTAGTATCTCGCAGGAGAGCTGGGAAGGAGAGTTACAAGTTGAAGGGCATATACCACCATGGCTGAATGGAACGTACCTGAGGAATGGGCCTGGGATGTGGCACATAGGAGACTATGACTTCCGACACCTCTTCGACGGTTACGCCACGGTGGTGAAGCTACGACTCCAGGAAGGCCGGTTATTCGCCGGCCACCGTCAACTTGAATCGGAGGCGTACCGAGCGGCGAAGAAGAATCAGAAGATATGCTACCGGGAGTTTTCGGAAGTGCCAAAGGCGGCGAATTTCCTGGCGTATGTGGGGGAGCTGGCGAGCCTGTTCTCCGGCGCGTCGCTGACGGACAACGCGAACACCGGGGTGGTGAAGCTTGGCGACGGGAGGGTGGTGTGTCTGACGGAGACGCAGAAGGGGTCGATTGTGATTGACCCTGAGACGCTGGAAACGGTGGGGAAGTTCGAGTACAGTGACTCGTTGGGGGGTCTGATTCACTCTGCGCACCCCGTTGTGACGGATAAGGAGTTTGTGACGTTGTTGCCGGATTTGGTGAGAGCAGGGTACCTTGTGGTGAGGATGGAGCCCGGTACCAATGAGAGGAGGGTAATTGGGCGGGTCAATTGCCGGGGCGGGTCTTCACCCGGCTGGGTTCACTCTTTTCCTGTCACCGAACACTATGTTGTTGTGCCCGAAATGCCGTTGAGGTACTGTGCTCAGAATCTGCTCAAGGCTGAGCCTACTCCTTTGTACAAGTTTGAGTGGCACCCTCAGTCTAAAGCTTTTATGCATGTCATGTGCAAGACCAGTGGAAATATTGTGGCAAGTGTGGAAGTACCTCTGTTTGTTACTTTCCATTTCATTAATGCTTATGAGGAGGAAGACGAAGATGGGAGGGTGACGGCCATTATTGCCGACTGTTGTGAGCATAATTCGGATCCTACCATTCTTGATAGACTTAGGTTACAGAACCTTCGTTCTTTTAATGGTGAAGATGTTCTACCCGATGCTAGGGTTGGACGGTTCAGAATACCACTGGATGGAAGTCCATATGGAGAACTAGATGCAGCATTGGACCCAAATGAACATGGGAAAGGCATGGACATGTGCAGCATAAACCCTAATAATCTAGGAAAGAAATACAGATATGCGTATGCTTGTGGAGCACAGCGACCTTGTAACTTTCCCAACACACTCACCAAGCTTGATTTAGAATTGAAAAAGGCTACGAACTGGCATGAAGAAGGTGCCGTACCCTCAGAACCATTCTTTGTTGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTGGTAATCTCCATTGTCAGCGAGAAAAATGGAGAAGGGTATGCGTTGCTGTTGGATGGTTCCACTTTTGAAGAGATTGCTAGGGCCAAGTTCCCTTATGGACTTCCCTATGGGTTGCATGGATGCTGGGTTCCAAAGGAGTAA 1716 0.5041 MAFTTMPFTTMPSSLTNSTSSPTMLLPPISHHNNHILPPNKLIVNKPKRKLLHLTVANVASPSLPMITPPTPEEQRSGTTAGRHHHHHVAWTSISQESWEGELQVEGHIPPWLNGTYLRNGPGMWHIGDYDFRHLFDGYATVVKLRLQEGRLFAGHRQLESEAYRAAKKNQKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPETLETVGKFEYSDSLGGLIHSAHPVVTDKEFVTLLPDLVRAGYLVVRMEPGTNERRVIGRVNCRGGSSPGWVHSFPVTEHYVVVPEMPLRYCAQNLLKAEPTPLYKFEWHPQSKAFMHVMCKTSGNIVASVEVPLFVTFHFINAYEEEDEDGRVTAIIADCCEHNSDPTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGELDAALDPNEHGKGMDMCSINPNNLGKKYRYAYACGAQRPCNFPNTLTKLDLELKKATNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSEKNGEGYALLLDGSTFEEIARAKFPYGLPYGLHGCWVPKE 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01810 571 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g01810 571 MobiDBLite consensus disorder prediction 63 87 - -
Vian4g01810 571 PANTHER BETA-CAROTENE DIOXYGENASE 93 569 IPR004294 GO:0016702
Vian4g01810 571 Pfam Retinal pigment epithelial membrane protein 95 569 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01810 Vian-Chr4 34394839 34397654 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01810 K17913 - gmx:100814148 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01810 4 34394839 34397654 Vian4g01810 4 34394839 34397654 ECH