Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01808 ATGGCTCATCTCTTCAGGGACCTATCATTGGGCCATTCCAAGAGAGACACAACTCCGCCCACCATAATGCCTCCAAAACCTTCCGCCCTTTCTTCCGCCGACGACCTCCCTTCTCCGCTCGGTCAACTCGCCGCCAACCTTTCCGATTCCGACCTTTCCTTAACAGCCTTCGAGATCTTCGTTGCCGCCTGCCGCACCTCCTCCGGCAAGCCGCTCAGTTCCATCCCTAATCACTCCTCCGTCCATTCACCCGGCCAGAACTCGCCCAACTCGCAAGCACTCCAGCGATCCATCACTTCCACCGCCGCCAGCAAGGTTAAGAAGGCCTTCGGCTTGAAATCGCCTGGTTCGGGCTCCAGAAAGAGTCCTGGCTCCGGTTCGGCTTCCGGTTCGGGCCAAGGAAAGCCGAAGCGACCGTTAACAGTCGGAGAACTCATGCGGAACCAGATGAGGGTTTCCGAAGCCATGGATTCGCGCGTGAGACGCGCTCTTCTCAGGATTTCCGCTGGCCAGGTCGGAAGAAGGATTGAGTCTGTGGTGGTTCCGCTTGAGTTGCTGCAGCAACTCAAGGCTTCGGATTTTACTGATCAGCAAGAGTACGTTGAGTGGCAGAAAAGAACCTTGAAGGTTCTGGAGACTGGTTTAATTTTGCATCCACAAATTCCCTTGGATAAGTCGAATTCTGCGGCACAGCGTCTGCGGCAGATTCTTCATGCTGCATTGGATAAACCTATAGAAACCGGGAAGAATACCGAATCTATGCAGGTTCTTCGTAGTGCTGTCATGTCTCTTGCAAATCGGTCGTATGATGGATCTTATGCTGATTCATGCCACTGGGCAGATGGGATTCCTCTGAATCTGCGGCTTTATGAAATGCTTTTGCAATCATGCTTTGATGCTAATGATGAATCGTCTATTATTGAGGAATTTGATGAGCTGATGGAACAAATCAAGAAGACCTGGGGTATCCTTGGGTTAAATCAGACGTTGCATAATCTTTGTTTCACTTGGGTTTTGTTTCACCGGTTTGTTGTGACTGGCCAGGTGGATTTGGAACTGCTATCTGCTGCTGATGGCCAGCTGGCAGAAGTTGCAAAAGATGCGAAGACAACAAAAGATGCAGAATATTCCAAAGTTTTGAGCTCTACGTTGACTTCTATATTGGGGTGGGCTGAGAAAAGGCTCCTTGCATATCATGAAACTTTTGACCGGGGTAGTGTTGAAACCATGCAGGGCATAGTCTCTTTAGGGGTAGCCGCAGCTAAGATTTTGGTTGAGGATATATCCAATGAGTATCGCCGGAGGAGAAGAAATGATGTCAATGTGGCACGTGAAAGAATTGAAACCTACATCAGGTCATCACTACGCACTGCTTTTGCCCAGATAATGGAGAAGGCAGACTCCAGCAGGAGAGCATCCAAAAATCAGCCAAATGCTCTCCCTGTCCTTGCCATCCTTGCGAAGGATGTAGGTAGCCTGGCAACCAATGAAAAACAAGTCTTCAGTCCAATACTTAAGAGGTGGCATCCTTTGGCAGCAGGTCTTGCTGTGGCCACCCTTCATTCATGCTATGGAAACGAATTAAAGCAGTTCATATCAGGTATCACAGAATTGACACCTGATGCGGTTCAAGTGTTGAGAGCTGCCGATCAGTTAGAGAAAGACCTTGTGCAGATAGCTGTGGAGGATTCTGTGGAAAGCGATGATGGTGGTAAAGCAATTATCCGTGAGATGCCTCCTTATGAGGCTGAAGGGGCAATTGCTAACCTTGTGAAAATATGGATTAAAACTAGAATAGACAGACTAAAGGAGTGGGTCGATAGGAATCTGCAGCAAGAGGTTTGGAGTCCTCAAGCAAATCAGGAAGGATATGCTCCATCTGCTGTTGATGTTTTGCGGATTATAAATGAGACATTGGATGCTTTCTTTCAGCTTCCGATACCCATGCATCCTGCAATGCTTCCGGAAGTGATGAATGGCCTTGACAAATGCCTTCAGTATTATGTCATCAAAGCAAAATCTGGCTGTGGATCACGAAACACATTTCTTCCAACAATGCCAGCGTTGACCAGGTGCACTATCGGTTCAAAGTTTCAGGGATTTGGCAAGAAAAAAGATAAATCTCCAAATCCTCAGAAGAGAAACCCTCAGGTTGCAACAAATGGGGATAGCTCTTCTGGAATACCACAACTCTGTGTTCGCATTAATACTTTGCAATGGATCCTGGGTGAATTTGATGTTCTGGAAAAGAGAATAATTACCCTTCTACGGAACTCTGAATCTGCTCATGTGGAAGATTTTTCAAATGGATTAGCAAAGAAGTTTGAACTATCTCCAGCTGCGTGTCTTGAAGGAATTCAGCAACTCTGCGAGGCTGCAGCCTATAGAGTTGTCTTTCATGATCTAAGCCATGTCTTATTGGATAGTTTGTACGTTGGGGATCCAGCATCTTCAAGAATTGAGCCATACCTTCAGGAACTTGAACGGAAATTAATGTTCATTTCAGATACTGTTCATGAAAGAATTCGCACACGAATTGTTACTGAAATAATGAGAGCTTCCTTTGATGGATTCTTGCTTGTATTGCTTGCTGGAGGTCCCTCCCGTGCTTTTAACCGGAAGGATTCTCAGATCATCGAGGATGATTTCAAATTTCTGAAGGAATTGTTTTGGGCAAATGGGGATGGCTTGCCTTCTGAATTAATAGATAAGTTTTCAACAACTGCGAGGTCTATCCTTCCCCTTTTCAGAACTGACACAGAGACCCTCATAGAGCAGTTTAGACGGTTGACCATGGAGACATATAAATCCTCCGCCAGGTCTAAACTTCCATTACCTCCCACCTCAGGACAGTGGAATCCGTCAGAACCAAACACATTGTTACGTGTGTTATGTTATAGAAATGATGAATCAGCTTCCAAGTTTCTGAAAAAGGCATATGATCTACCTAAGAAACTTTGA 2961 0.4613 MAHLFRDLSLGHSKRDTTPPTIMPPKPSALSSADDLPSPLGQLAANLSDSDLSLTAFEIFVAACRTSSGKPLSSIPNHSSVHSPGQNSPNSQALQRSITSTAASKVKKAFGLKSPGSGSRKSPGSGSASGSGQGKPKRPLTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESVVVPLELLQQLKASDFTDQQEYVEWQKRTLKVLETGLILHPQIPLDKSNSAAQRLRQILHAALDKPIETGKNTESMQVLRSAVMSLANRSYDGSYADSCHWADGIPLNLRLYEMLLQSCFDANDESSIIEEFDELMEQIKKTWGILGLNQTLHNLCFTWVLFHRFVVTGQVDLELLSAADGQLAEVAKDAKTTKDAEYSKVLSSTLTSILGWAEKRLLAYHETFDRGSVETMQGIVSLGVAAAKILVEDISNEYRRRRRNDVNVARERIETYIRSSLRTAFAQIMEKADSSRRASKNQPNALPVLAILAKDVGSLATNEKQVFSPILKRWHPLAAGLAVATLHSCYGNELKQFISGITELTPDAVQVLRAADQLEKDLVQIAVEDSVESDDGGKAIIREMPPYEAEGAIANLVKIWIKTRIDRLKEWVDRNLQQEVWSPQANQEGYAPSAVDVLRIINETLDAFFQLPIPMHPAMLPEVMNGLDKCLQYYVIKAKSGCGSRNTFLPTMPALTRCTIGSKFQGFGKKKDKSPNPQKRNPQVATNGDSSSGIPQLCVRINTLQWILGEFDVLEKRIITLLRNSESAHVEDFSNGLAKKFELSPAACLEGIQQLCEAAAYRVVFHDLSHVLLDSLYVGDPASSRIEPYLQELERKLMFISDTVHERIRTRIVTEIMRASFDGFLLVLLAGGPSRAFNRKDSQIIEDDFKFLKELFWANGDGLPSELIDKFSTTARSILPLFRTDTETLIEQFRRLTMETYKSSARSKLPLPPTSGQWNPSEPNTLLRVLCYRNDESASKFLKKAYDLPKKL 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01808 986 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 817 927 IPR014772 -
Vian4g01808 986 MobiDBLite consensus disorder prediction 118 134 - -
Vian4g01808 986 PANTHER PROTEIN UNC-13 HOMOLOG 30 984 IPR008528 -
Vian4g01808 986 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 543 686 IPR014770 -
Vian4g01808 986 MobiDBLite consensus disorder prediction 68 142 - -
Vian4g01808 986 MobiDBLite consensus disorder prediction 700 725 - -
Vian4g01808 986 MobiDBLite consensus disorder prediction 68 104 - -
Vian4g01808 986 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01808 Vian-Chr4 34360613 34364938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01808 - - gmx:100814675 1800.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01808 4 34360613 34364938 Vian4g01808 4 34360613 34364938 ECH