Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01805 ATGTTCTCTTCAATCCTAAATTCTAATCAACCTCGGGATAAGCAACAACAGAAACAAAAGGAAGAATGGTTCGCGGGGAGTTTCAAGGCAGAGAACTTCATTCCAGGTCTTGTTATAGGTTTCATTTTTGGGTTGTTGTTAGATTTAACAAAGCCCAGTAGAAATCACTTGTCCAAGAAACAATTGTCATCTACCAAGCTTCAAGAGCAACTCTCAGTCTCCAGCAATGGTGACCGAGAACTTAAAATGGTTCTGGTCGTTCGACAAGACTTGAAGATGAAATCTGGAAAGATTGCATCTCAATGTGCTCATGCTGCAACTGGCATGTATGCTGAGTTAATGCAAAGTGATAGGTCTCTTCTGAGACAATGGGAACAGTGTGGCCAGCCCAAAATTGTTGTGACTTGCAGGAATCAACAAGAGATGAATAAACTGAAGGACACAGCTGAGAGTATTGGCCTTCCTACATTTGTTGTTGCTGACGCAGGAAGAACACAGGTTTCGGCAGGATCAAAAACTGTTCTTGCTGTTGGACCTGGACCAAAATCATCTGTGGATGCGGTGACTGGTAGATTGCCACTGCTTTGA 588 0.4286 MFSSILNSNQPRDKQQQKQKEEWFAGSFKAENFIPGLVIGFIFGLLLDLTKPSRNHLSKKQLSSTKLQEQLSVSSNGDRELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRSLLRQWEQCGQPKIVVTCRNQQEMNKLKDTAESIGLPTFVVADAGRTQVSAGSKTVLAVGPGPKSSVDAVTGRLPLL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01805 195 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g01805 195 Gene3D Bit1 79 195 IPR023476 -
Vian4g01805 195 NCBIfam aminoacyl-tRNA hydrolase 81 195 IPR002833 GO:0004045
Vian4g01805 195 Pfam Peptidyl-tRNA hydrolase PTH2 81 195 IPR002833 GO:0004045
Vian4g01805 195 CDD PTH2 82 195 IPR002833 GO:0004045
Vian4g01805 195 SUPERFAMILY Peptidyl-tRNA hydrolase II 80 195 IPR023476 -
Vian4g01805 195 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 79 195 - -
Vian4g01805 195 PANTHER PEPTIDYL-TRNA HYDROLASE 2 14 195 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01805 Vian-Chr4 34346181 34348767 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01805 K04794 - gmx:100527852 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01805 4 34346181 34348767 Vian4g01805 4 34346181 34348767 ECH