Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01800 ATGTCTGAACTTTCAAACGTTAAACCAGACATTTACTTACATGTGTTTTCCACACAGGAGCAGAATGAGCAAAAGCTTCGAAAGGCTGTGTCGGACGTGTCGAGTGAAATTGAGAAATACTATAGCGAGTTGAAGTTGGAGAGGCAGCAACTTGGTGCGATTGAAGAGGTGGAACAAGCTGAATGTCAGTGTTGTGGGTTGAAAGAGGATTGCACTTCGGTTTATATCACAGAGGTTGAAGAGTGTTACTGTGGAAAGTGGGTTTGTGGGCTTTGTTCTGAAGCTGTTAAAGAAAGAGTAGGGCCATGTCCCACTACAGTAGCCATGCAAGATGCTTTGAACTCGCACAGGGATTTCTGTCAGGAATATAACGCTACCAGACTTAACCCTCAACTCTCGTTAACTCATTCTATGAGGGAAATAGCCAAAAGAAGTTTTCAGAATAGGAAATCCAAGCTTACTCGCACCACTAGTTATCCCTGA 483 0.4327 MSELSNVKPDIYLHVFSTQEQNEQKLRKAVSDVSSEIEKYYSELKLERQQLGAIEEVEQAECQCCGLKEDCTSVYITEVEECYCGKWVCGLCSEAVKERVGPCPTTVAMQDALNSHRDFCQEYNATRLNPQLSLTHSMREIAKRSFQNRKSKLTRTTSYP 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01800 160 PANTHER OS01G0745000 PROTEIN 50 157 IPR012876 -
Vian4g01800 160 Pfam Protein of unknown function (DUF1677) 57 144 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01800 Vian-Chr4 34270861 34271343 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01800 - - vun:114163704 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01800 4 34270861 34271343 Vian4g01800 4 34270861 34271343 ECH