Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01798 ATGTCTTCCGCCGAGACGGAGATGGAGCCTCTCACGTCGGGGGCGAGCAACCGCATAATTCCGCTCCTCAAGGCTCTCAGGGCTTCGCTCATCTTCGTCTACACCTTCTTCCTCTCCTTCCTCTTCTTCATCCTCCCCCGCCGCCGCCGCCTCTCCTCAACGGCGGGGCCACCATCACCCAAGAAGCATTTGAGGCGGCGCTGGCTCGTGCTCGAGGAGGAGGACACGTGCCGGCGGAGAGCCTTGGCGCAGGACTACCTTGGAATGGGTCGCGACGAAGGGTGGTGCCGGTGGAGCACTTCCATTTTCTATGGGGTTAGAAACAACGCTTTGTTTTGCCGCTCTTGGTTCCCAGTTTCCGAAGATGTCAAGGGCATTCTGATCATCATTCATGGGCTCAATGAACACAGCGGAAGATATGCGGACTTTGCGAGGCAATTAACATCATGCAACTTTGCTGTCTATGCAATGGACTGGATAGGTCATGGAGGCAGTGATGGATTGCATGGTTATGTTCCTTCTCTTGATCATGTGGTTGCAGATACAGGGGCTTTCCTAGAAAAGATCAGATCGGATAATCCTGGAATACCATGCTTTCTCTTTGGTCACTCCACTGGGGGAGCTGTGGTCTTGAAAGCTGCTTCCCATCCTCATATTGAAGTAATGGTGGAAGGAATTATATTAACCTCGCCAGCTTTAGGTGTGAAGCCAGCTCATCCAATTGTTGGGGCTGTTGCTCCAATTTTTTCTCTGGTGGCTCCAAGGTTCCAATTCAAAGGAGCAAACAAAAGGGGCATTCCAGTTTCGAGGGATCCAGCAGCGTTGTTGGCGAAGTACACAGATCCTTTGGTGTACACAGGACCTATAAGGGTACGAACTGGGCATGAAATATTACGGATATCCTCGTACTTAATGCGAAACTTCAACTCCGTGACTGTACCATTCTTTGTTCTGCACGGCACTGCTGATAAGGTAACTGATCCACTGGCCTCACAAGATCTGTATGACAAAGCAGCTTCAAAATTCAAAGACATAAAGCTGTATGATGGTTTTTTACACGACCTTCTGTTTGAGCCTGAGCGTGAAGAGATTGCTCAGGACATTATCAACTGGATGGAAAAGAAACTATTCACTATCTGA 1140 0.4965 MSSAETEMEPLTSGASNRIIPLLKALRASLIFVYTFFLSFLFFILPRRRRLSSTAGPPSPKKHLRRRWLVLEEEDTCRRRALAQDYLGMGRDEGWCRWSTSIFYGVRNNALFCRSWFPVSEDVKGILIIIHGLNEHSGRYADFARQLTSCNFAVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIRSDNPGIPCFLFGHSTGGAVVLKAASHPHIEVMVEGIILTSPALGVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYTDPLVYTGPIRVRTGHEILRISSYLMRNFNSVTVPFFVLHGTADKVTDPLASQDLYDKAASKFKDIKLYDGFLHDLLFEPEREEIAQDIINWMEKKLFTI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01798 379 Pfam Serine aminopeptidase, S33 122 360 IPR022742 -
Vian4g01798 379 SUPERFAMILY alpha/beta-Hydrolases 108 376 IPR029058 -
Vian4g01798 379 PANTHER PHOSPHOLIPASE-RELATED 107 374 - -
Vian4g01798 379 FunFam Monoglyceride lipase 97 376 - -
Vian4g01798 379 Gene3D alpha/beta hydrolase 97 376 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01798 Vian-Chr4 34252118 34255537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01798 1 296 Acyl Lipid Metabolism Gene Families AT5G11650 68.421 1.00e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01798 - - gmx:100816265 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01798 4 34252118 34255537 Vian4g01798 4 34252118 34255537 ECH