Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01793 ATGAAACGGACACACTTCAGTCTGCCACATGTGGCAGACATCACATGCATGGACCCCAACCGTCCACCGCTCGTTCCGGAGAAGCTCTCCAAAACGGTGCGTTTCCTCGGCTTCTTCATACAAAACGACGTCATGAAGCGGGGGAAGAACATAGGGAAGGCGCTCAACGACGTCGTCGTGCGGCACCACCAGGCCCTCACATGCCGCCCACGTGACCCTCACGTCTCCTTCGTGTCGCCGCTGGAGTATCAGTTCAGCTGCAGCGGGAGTCCGCCGCGCCTCTCGCATGCCAGTCGGAGGAAGCTCTCTCCGCCCTCTTCAAGCCGCTCGCCGGCTCATCGCGCTGTGAGGATGTGCCGTGGCGGTGGTGAAGGCATCATAGAGAGGCGCGTGAAGATCGCGGGGTCCGCCGCTTCCATGCTGAACGATGTCGTGGAGAAGGACTTCCACGTGGACGAGGCCGCGGAGGAGTTCATAGCGAGGTTCTACAGAGAGTTGAGGTTGCAGAAATGGTTGGATCACTATTGCTGA 531 0.597 MKRTHFSLPHVADITCMDPNRPPLVPEKLSKTVRFLGFFIQNDVMKRGKNIGKALNDVVVRHHQALTCRPRDPHVSFVSPLEYQFSCSGSPPRLSHASRRKLSPPSSSRSPAHRAVRMCRGGGEGIIERRVKIAGSAASMLNDVVEKDFHVDEAAEEFIARFYRELRLQKWLDHYC 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01793 176 Pfam Cotton fibre expressed protein 150 170 IPR008480 -
Vian4g01793 176 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 25 172 - -
Vian4g01793 176 MobiDBLite consensus disorder prediction 89 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01793 Vian-Chr4 34229587 34230117 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01793 - - pvu:PHAVU_009G111200g 323.168