Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01791 ATGGACCGCTTGCGTCCTCGGAACCGAGAGGTTTTTTCTGGATTTACAAATGCAGAGATTGAGAAAATGAAAAATTTCTTGAATGAACCTAAAGGAGTAACATGGGGCAGAGAATTTTACCAAAAACTGGCTGGAAGTTTCAATCGTTCCACTGGTCGTGCAGGGAAGCCTGTCATAAAATGGACAGAGATTGAAGGTTGGTTTCAGGCAAGGCTCCTAGACTTACCACAAGTCCCTAACAGTGAGTTGATGGTTTCTAAATGTAAGGAAGGTGAGTCTTCTGATGGGCCTTATGATGTTATGCAAGATCCATCAGAGTTGGAATTTGAAGCAAAATCATCAAAAGACGGGGCATGGTATGATGTTGAGGCATTTCTTGCTCACAGATTTCTTAGCACAGGGGAAGCTGAAGTTCATGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAGTGGATCAATATTAAAAGTTCAGTCCGTCAACGCTCTATCCCATTGGAAAACACGGAGTGTTCGAACCTAAATGTTGGAGACTCTGTCCTATGCTTCCAGGAGAGGAGAGATCAAGCAATTTACTTTGATGCTCAGATCGTAGAGATCCAAAGGAGAATGCATGATATTAGAGGTTGCAGGTGTCTCATCTTAATAAGATATGATCATGACAACAGTGAGGAAAGGGTTCGATTGAGAAGACTTTGCCGCAGAGCAAAATATTAG 717 0.4226 MDRLRPRNREVFSGFTNAEIEKMKNFLNEPKGVTWGREFYQKLAGSFNRSTGRAGKPVIKWTEIEGWFQARLLDLPQVPNSELMVSKCKEGESSDGPYDVMQDPSELEFEAKSSKDGAWYDVEAFLAHRFLSTGEAEVHVRFVGFGAEEDEWINIKSSVRQRSIPLENTECSNLNVGDSVLCFQERRDQAIYFDAQIVEIQRRMHDIRGCRCLILIRYDHDNSEERVRLRRLCRRAKY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01791 238 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 10 237 IPR039276 -
Vian4g01791 238 Gene3D - 166 237 - -
Vian4g01791 238 Gene3D - 104 165 - -
Vian4g01791 238 Pfam SAWADEE domain 106 233 IPR032001 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01791 Vian-Chr4 34201415 34204585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01791 - - gmx:100817690 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01791 4 34201415 34204585 Vian4g01791 4 34201415 34204585 ECH