Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01786 ATGGAAGTTGAAGCTGGTAAGAGTGTTAGTAGGAGTGCAGAAGTGGATGATGATGGCAAAATCAAAAGAACTGGTAACGTGTTCACCACAACGACGCACATAATAACGGTGGTGGTAGGAGCAGGAGTGCTGGCTCTGGCATGGGCCATGGCTCAATTAGGATGGATACCCGGCACAATCACCATGATCATATTTGCATGCATTTCCGTTTACACTTACAATCTGATAGCTGATTGTTACAGATATCCTGACCCAATCAATGGCAAAAGGAACTACACTTACATGCAGGCAGTCCATGCATATCTTGGTGGGACAATGCATGTGTTTTGTGGATTGATTCAGTATGGGAAGCTTGCTGGGATTACTGTTGGCTACACTATAACTTCGTCTACTAGTTTAGTGGCTATAAAAAAGGCTATTTGCTTTCACAGAAGAGGTCACCAAGCTTATTGCAAGTTTTCTAATAATCCCTACATGATTGGTTTTGGGATGTTGCAAATTTTGCTGTCTCAAATCCCAAATTTCCACAAGCTAACATATCTTTCAACCGCTGCTGCAATTACCTCTTTTGGTTATGCATTCATTGGTAGTGGGCTTTCTCTGGCAGTCGTGGTCTCAGGTAAAGGAGAACCAAGCTATATATTTGGAAACAAAGTAGGGCCAGGATTATCAGAAGCAGATAAAATTTGGAGGGTTTTCAGTGCTTTGGGAAACATTGCACTTGCTTGCTCGTATGCAACTGTTGTGTATGATATAATGGACACTTTGAAGTCATATCCACCCGAATGCAAACAGATGAAAAAGGCCAATGTGTTAGGAATCACCATAATGACACTACTTTTTCTGCTATGTGGTGGCCTTGGCTATGCTGCTTTTGGGGATCACACTCCTGGAAACATCCTCACTGGCTTTGGATTTTACGAGCCATTCTGGTTGGTTGCTCTTGGCAATGTCTTCATTGTAACCCACATGGTGGGAGCATATCAGGTGCTTGCTCAACCACTGTTTCGTATAATTGAGATGGGTGCTAACTTGGTGTGGCCACGTTCAGATTTCATAAACAAAGAATACCCGACAAAAATAGGCTCCTTGACATTCAGTTTCAACCTTTTTAGGCTAATTTGGAGGACAATATTCGTGGCAGTGGCAACAACTATAGCCATGGCCATGCCGTTTTTCAATGAGTTTCTAGCTCTTCTTGGAGCAATTGGGTTTTGGCCTCTCATCGTGTTTTTCCCCATACAGATGCACATTGCACAGAAACAGATCAAAAGATTATCATTGAAATGGTGTGTTCTCCAGCTATTGAGCTTTGTGTGCTTCCTTGTCTCAGTAGTCGCTGCAGTCGGTTCCATTCGTGGAATTAGCAAGAACATAAGAAAATACAAACTTTTCATGTATAAACAATAG 1410 0.422 MEVEAGKSVSRSAEVDDDGKIKRTGNVFTTTTHIITVVVGAGVLALAWAMAQLGWIPGTITMIIFACISVYTYNLIADCYRYPDPINGKRNYTYMQAVHAYLGGTMHVFCGLIQYGKLAGITVGYTITSSTSLVAIKKAICFHRRGHQAYCKFSNNPYMIGFGMLQILLSQIPNFHKLTYLSTAAAITSFGYAFIGSGLSLAVVVSGKGEPSYIFGNKVGPGLSEADKIWRVFSALGNIALACSYATVVYDIMDTLKSYPPECKQMKKANVLGITIMTLLFLLCGGLGYAAFGDHTPGNILTGFGFYEPFWLVALGNVFIVTHMVGAYQVLAQPLFRIIEMGANLVWPRSDFINKEYPTKIGSLTFSFNLFRLIWRTIFVAVATTIAMAMPFFNEFLALLGAIGFWPLIVFFPIQMHIAQKQIKRLSLKWCVLQLLSFVCFLVSVVAAVGSIRGISKNIRKYKLFMYKQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01786 469 Pfam Transmembrane amino acid transporter protein 24 454 IPR013057 -
Vian4g01786 469 PANTHER OS05G0424000 PROTEIN-RELATED 27 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01786 Vian-Chr4 34123589 34126009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01786 3 465 Organic Solute Cotransporters AT1G10010 52.155 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01786 K24917 - gmx:100802090 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01786 4 34123589 34126009 Vian4g01786 4 34123589 34126009 ECH