Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01781 ATGGCGTCCAGCGATTCCGATTCGCAGTTGAAGATCGTCCATGGCGACGCTGGTTACATTCTCGAAGACGTTCCTCATTTCACCGATTACATTCTAAATCTTCCTATGTATCCGAATCCGCTTCGGTCCAATCCTGCTTACTCGGTTGTTAAACAGTATTTCGTGCATATGGACGACACTGTGCCTCAGAAGGTTGTTGTTCACAAGGATGGTCCAAGAGGTGTACATTTTAGACGTGCAGGCCCTCGACAAAAGGTATACTTTAGATCGGATGATGTGCACGCATGCATTGTCACTTGCGGCGGACTATGCCCTGGCCTCAACACTGTCATAAGGGAAATTGTCTGTGGTCTTTCTTACATGTATGGTGTTAACAAAGTCCTTGGCATAGATGGAGGTTATAGAGGTTTTTATTCCAAGAACACCATTACTTTAACACCTAAGGTGGTCAATGACATCCATAAGCGTGGAGGTACAATTCTTGGGACGTCACGAGGGGGGCATGATACCAGCAAGATAGTTGACAGCATCCAGGATCGAGGAATTAATCAGGTTTATATTATTGGAGGAGATGGTACACAGAGAGGAGCTACTGTGATTTATGAGGAAGTTAGACGGCGGGGTCTGAAAGTAGCAATTGCAGGAATTCCCAAAACCATAGATAATGACATCCCGGTTATTGACAAATCCTTTGGTTTTGATACTGCGGTCGAGGAGGCTCAACGTGCCATCAATGCAGCACATGTTGAAGCTGAAAGTATTGAGAATGGCATTGGTGTTGTAAAGCTAATGGGACGTTATAGTGGCTTTATTGCTATGTATGCTACTCTTGCTAGCAGAGATGTGGACTGTTGCTTGATTCCAGAGTCACCCTTCTACCTTGAAGGAAAGGGTGGACTTTTTGAATTTATTGAGAAAAGGCTGAAAGAAAATGGGCATATGGTCATAGTCATAGCGGAGGGAGCAGGACAAGATCTTCTTACTGAAAGTATGCAAGACATGGACCAGAAAGATGCTTCTGGAAACAAACTACTTCAAGATGTTGGTTTATGGATATCTCATAAGATCAAGGATCACTTTGCAAGGAAGGATAAGATTGCCATCAATCTTAAATATATAGATCCAACCTACATGATCCGAGCAATTCCAAGCAATGCATCAGATAATGTCTACTGTACACTTCTTGCTCAGAGTGCAGTGCATGGTGCAATGGCAGGGTATACCGGATTTACATCTGGACTGGTCAATGGCAGACATACTTATATCCCATTCAATAGAATCATTGAGAGGCAGAACAAGGTTGTGATTACTGATAGAATGTGGGCAAGACTCCTTTCTTCTACCAACCAGCCAAGCTTTTTGAGCCCGAAAGATTTAGACGAAGCCAAGAAAGCGGAACAACCTCCGAGTCAATTGTTAGAAGGGAGCAGTTGCAATGATATTGGTGAAGCTGAGAAAAAAGAAAACACTTTCAGTCAATTGTTAGAAGGGGACAATTTCAAAGATCAACAACAATCTGAAAACCATGCAGACAATGGTATCGAGACGATAAATTAG 1557 0.4297 MASSDSDSQLKIVHGDAGYILEDVPHFTDYILNLPMYPNPLRSNPAYSVVKQYFVHMDDTVPQKVVVHKDGPRGVHFRRAGPRQKVYFRSDDVHACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQRGATVIYEEVRRRGLKVAIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMVIVIAEGAGQDLLTESMQDMDQKDASGNKLLQDVGLWISHKIKDHFARKDKIAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTSGLVNGRHTYIPFNRIIERQNKVVITDRMWARLLSSTNQPSFLSPKDLDEAKKAEQPPSQLLEGSSCNDIGEAEKKENTFSQLLEGDNFKDQQQSENHADNGIETIN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01781 518 Gene3D - 90 279 - -
Vian4g01781 518 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 5 461 - -
Vian4g01781 518 SUPERFAMILY Phosphofructokinase 28 461 IPR035966 GO:0003872|GO:0006096
Vian4g01781 518 MobiDBLite consensus disorder prediction 495 518 - -
Vian4g01781 518 MobiDBLite consensus disorder prediction 453 478 - -
Vian4g01781 518 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 24 454 IPR012004 GO:0003872|GO:0005524|GO:0006096
Vian4g01781 518 FunFam ATP-dependent 6-phosphofructokinase 89 279 - -
Vian4g01781 518 Pfam Phosphofructokinase 96 401 IPR000023 GO:0003872|GO:0006096
Vian4g01781 518 PRINTS ATP-dependent phosphofructokinase family signature 214 231 IPR022953 GO:0003872|GO:0006002|GO:0006096
Vian4g01781 518 PRINTS ATP-dependent phosphofructokinase family signature 97 116 IPR022953 GO:0003872|GO:0006002|GO:0006096
Vian4g01781 518 PRINTS ATP-dependent phosphofructokinase family signature 253 269 IPR022953 GO:0003872|GO:0006002|GO:0006096
Vian4g01781 518 PRINTS ATP-dependent phosphofructokinase family signature 310 322 IPR022953 GO:0003872|GO:0006002|GO:0006096
Vian4g01781 518 PRINTS ATP-dependent phosphofructokinase family signature 232 250 IPR022953 GO:0003872|GO:0006002|GO:0006096
Vian4g01781 518 PRINTS ATP-dependent phosphofructokinase family signature 181 197 IPR022953 GO:0003872|GO:0006002|GO:0006096
Vian4g01781 518 PIRSF ATP_PFK_TP0108 1 458 IPR012004 GO:0003872|GO:0005524|GO:0006096
Vian4g01781 518 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01781 Vian-Chr4 34073837 34081509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01781 K00850 - gmx:100818755 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01781 4 34073837 34081509 Vian4g01781 4 34073837 34081509 ECH