Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01770 ATGGATCCTTGCCCTTTCGTCAGGTTGACAGTCGGCAACCTCGCCCTCAAAATCCCCGTTGCTTCCAAACCGGCGCGCTCTGTCGTTCACCCTTCTTCTTCCCCCTGTTTCTGCAAAATCAAGCTCAAGAGCTTCCCTCTACAGTCCGCAGTTGTTCCCTTCATCCCTCCCGAGAACAACCTCCCCGACTCCCACGTCCACCCCATCGCTGCAACCTTCCACCTCAGCAAGTGTGATCTCGACAGGCTTGCCGGAAAATCCATCTTCGCCGGCAAGCTCTGCCTCAAAATCTCGATCTATACCGGCCGTAGAGGTACTACCTGTGGCGTCAACTCCGGGAGACTCCTCGGCAAAGTTTCCGTGCCTTTGGATCTCTCGGGAACGGTAGCGAAGACCACCGTGTTCCACAATGGCTGGATTAGGATAGGGAAAGACGCCAAAGGCTCTTCCGCACAGTTCCATTTGAATGTAAAAGCTGAACCCGACCCCAGATTCGTCTTCCAGTTCGATGGCGAACCTGAATGCAGTCCCCAAGTTTTTCAGATCCAGGGTAACATCTCACAACCAGTTTTCACCTGCAAGTTCAGTTTCAGAAACACCGGCGACCGAAATCACCGTTCCAGGTCGTTACAGTCAGAGCCGGGAGGTTCTAGAAGCTGGTTGAGTTCGTTCGGAAGTGAGCGCGAGCGTCCGGGTAAGGAGCGCAAGGGATGGTCCATTACAGTTCACGACCTTTCCGGTTCGCCGGTTGCGGCAGCTTCCATGGTCACACCTTTCGTCGCCTCGCCCGGTTCGGACCGGGTCAGCTGCTCCAATCCCGGTTCGTGGCTCATTCTTCGCCCGAGCGACGGTACATGGAAGCCCTGGGGTAGGCTCGAGGCGTGGCGTGAGCGCGGCGGCTCCGACGGCCTCGGCTACCGCTTCGAGCTCATACCGGACACCAACGGCGGCATGAGCGCAGCGGGCATAGTGCTTGCGGAGTCCACGCTGAGCACGTACAAAGGAGGAAAGTTTGTCATTGATATGGGTTGTCGCAGCGGAGGAAATAACGGCGGATCGAACGGCCGTGCCACGCCGGGGAGTGCAACGTCGCCCGCATGCAGCCCGAGGAACAGCGGAGACTATGGGTACGGCCTCTGGCCTTACTGTATGTATAGAGGATTTGTGATGTCAGCGAGCGTGGAGGGCGAGGGGAGGTGCAGCAAGCCTAAGGTGGAGATTAGCGTGCCGCACGTCAACTGCACGGAGGATGCGGCGGCGTTTGTAGCGCTAGCTGCAGCGGTGGATCTGAGCGTTGATGCCTGCAGGCTTTTCTCTCAAAGGCTTAGGAAGGAGCTGTGCCAGCAGGTGGAATTGGTTGGGTGA 1365 0.5773 MDPCPFVRLTVGNLALKIPVASKPARSVVHPSSSPCFCKIKLKSFPLQSAVVPFIPPENNLPDSHVHPIAATFHLSKCDLDRLAGKSIFAGKLCLKISIYTGRRGTTCGVNSGRLLGKVSVPLDLSGTVAKTTVFHNGWIRIGKDAKGSSAQFHLNVKAEPDPRFVFQFDGEPECSPQVFQIQGNISQPVFTCKFSFRNTGDRNHRSRSLQSEPGGSRSWLSSFGSERERPGKERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRVSCSNPGSWLILRPSDGTWKPWGRLEAWRERGGSDGLGYRFELIPDTNGGMSAAGIVLAESTLSTYKGGKFVIDMGCRSGGNNGGSNGRATPGSATSPACSPRNSGDYGYGLWPYCMYRGFVMSASVEGEGRCSKPKVEISVPHVNCTEDAAAFVALAAAVDLSVDACRLFSQRLRKELCQQVELVG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01770 454 PANTHER OS08G0163500 PROTEIN 1 449 IPR010410 -
Vian4g01770 454 MobiDBLite consensus disorder prediction 201 237 - -
Vian4g01770 454 MobiDBLite consensus disorder prediction 210 224 - -
Vian4g01770 454 Pfam Protein of unknown function (DUF1005) 1 447 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01770 Vian-Chr4 33981085 33982787 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01770 - - gmx:100805268 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01770 4 33981085 33982787 Vian4g01770 4 33981085 33982787 ECH