LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian4g01768	ATGAGGTTGAGGGAGAACGACGACGGTGGTGAGAAAGAGGAAGTGGTGGAGAATGATGTCACCCTGGCCCAAAATCAATGGTGTCCGGTGGTCAATGCGGGGTTTTCGTCGCCCAAGAGACTGGTTGTGGTTGGTTATGCTCTTACTACTAAAAAGATTAAGAGCTTTTTACAGCCTAAGCTTGAAGGTTTAGCTAGGAACAAGGGAATACTATTCGTGGCTATTGACCATAATAGGCCCCTTTCAGATCAAGGTCCTTTTGATATTGTCTTGCATAAGTTATCAGGGAAAGAGTGGCGCCAGGTTCTTGAGGATTATAGGCAGTCACATCCTGAGGTTACAGTTTTGGACCCTCCAGATGCCATACAACATTTACGCAACCGTCAGTATATGCTTCAGGCTGTAGCAGATATGAACCTTTGTGATTCCTATGGCATCGTGGGTGTTCCTCGGCAATTAGTTATCAAGAGAGAGGCATGCGCTATTCCAGAGTTGGTCAACCAAGCTGGCTTGACTTTACCCCTTGTTGCAAAGCCACTAGTTGCCGATGGAAGTGCAAAGTCACATGAATTATCCCTTGCTTATGAGAAGTTTTCCCTTCAAAAACTTGAACCTCCTCTTGTTCTTCAGGAATTTGTCAATCATGGGGGTGTTCTCTTCAAGGTTTATATAGTTGGTGATGCTATAAAGGTAGTAAGGCGGTTTTCATTACCTGATGTTAGCAAGTGGGAACACTCCAAAGATGCTGGGATATATAATTTTCCAAGGGTTTCGTGTGCTGCAGCTTCGGCAGATGATGCAGATCTGGATCCTACTGTCGCTGAGCTTCCTCCAAGGCCATTACTAGAGAAACTAGCTAAGGAACTTCGATGGCGATTGGGTCTTCGTCTATTCAACCTGGATATTATCCGTGAATATGGAACAAGAGATCACTTTTACGTCATCGACATAAATTACTTCCCTGGATATGGCAAAATGCCTGAGTATGAACACATATTTACTGATTTCCTGTTGAGCCTGGGGCAGGGGAAGTACAAGAAAAGATCAGGCTAA	1053	0.4444	MRLRENDDGGEKEEVVENDVTLAQNQWCPVVNAGFSSPKRLVVVGYALTTKKIKSFLQPKLEGLARNKGILFVAIDHNRPLSDQGPFDIVLHKLSGKEWRQVLEDYRQSHPEVTVLDPPDAIQHLRNRQYMLQAVADMNLCDSYGIVGVPRQLVIKREACAIPELVNQAGLTLPLVAKPLVADGSAKSHELSLAYEKFSLQKLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVSKWEHSKDAGIYNFPRVSCAAASADDADLDPTVAELPPRPLLEKLAKELRWRLGLRLFNLDIIREYGTRDHFYVIDINYFPGYGKMPEYEHIFTDFLLSLGQGKYKKRSG	350

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian4g01768	350	Gene3D	-	118	322	-	-
	Vian4g01768	350	FunFam	Inositol-tetrakisphosphate 1-kinase	33	143	-	-
	Vian4g01768	350	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain	43	122	IPR041429	-
	Vian4g01768	350	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain	143	338	IPR040464	-
	Vian4g01768	350	PIRSF	ITPK	11	350	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Vian4g01768	350	FunFam	Inositol-tetrakisphosphate 1-kinase 4	118	322	-	-
	Vian4g01768	350	PANTHER	INOSITOL-TETRAKISPHOSPHATE 1-KINASE	39	344	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Vian4g01768	350	FunFam	Inositol-tetrakisphosphate 1-kinase	153	252	-	-
	Vian4g01768	350	SUPERFAMILY	Glutathione synthetase ATP-binding domain-like	118	324	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian4g01768	Vian-Chr4	33963608	33968695	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian4g01768	K00913		-	gmx:100127409	652.899

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian4g01768	4	33963608	33968695	Vian4g01768	4	33963608	33968695	ECH