Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01767 ATGGCGTCTTCTAAGAGGCCGAATGTAGAGCCTAACGGGAAAGGGAAACGCCAAAAATCTTCCGGTGGTTTTTCGTCGTTGGATGTTTCTCCAGGGACTGCGGTTTTCCGTTTGCTCTGTCCCGTTTCAAGAATTGGCAGTGTTATTGGAAAAGGTGGTGCCATCATTTCACAAATTCGCCAAGAAAGTGGTGTGAAGGTTAAGATTGAGGAAGCTATACCTGGGTGTGATGAAAGGGTTATCACTATCTCAGGTTCTGATAAAGAAGCGGAAGAAGTTCATGCAGAGCAGGTAAGGGAGGTTAACAATGATAATGCTGGAATCGAGGGGAAAGGGGATGAAGAGGAGAGGGATGGTGGTGATGGTGCTGGTGATGATAATGAAGAAAAGGAAGATAAAAGTTCGGTTCTCGTTGAAGATTCTCCCAGTGAAAAAGGGAATTCCGCCATTCGGAAGGCTATATCATTAGTTTTTGAGAGAATGGTTGAGGGAGTAGAGGAGATGAGTGAAGGGGATGAAGAAAGTAATAAATCTTCTACCCTTGTTTTTAGGTTACTTATTCTTACTACTCAAGTTGGATGCCTTCTGGGAAAGGGTGGTAGTGTGATTAAGAGAATGGCAGCTGAAAGTGGTGCACATATTCGGATCCTTCCTAAAGTCAAACTTCCAGCGTGTGCATCAGCTTCTGATGAGATAGTTCAGATCTCAGGAGGAGTAGATGTTGTCAGGAAAGCTCTTCAATCTGTTTCTCATCAACTATTGGAAAATCCACCACGGGATCATGAATTGTCAGCTAATTTTAACGGGTCTTCTCATTCATCTGGACAATTCGCACCTCACAGCCGTTCTTTTGGCGGTCAACCTTTTGGTGCTGCCCATGATATTTCTATTTTTCATTCTGGCCCTCCATTGATGTCCAAGTTTCATGAAGCTGCCATTCACGGTCGCACGAGACCTATGCAGGAAATGCTTACTTTTCGTTTATTGTGTCCTGTGGAAAGGGCAGGAAATGTAATTGGTAAAGGTGGAACAATCATAAAGACACTTCAGCAAGAGACAGTAAGTGATATCAAGATTGTAGAAAGTCCTCCAGATTCAGAGGATTGTGTTATTGTTATATCTGGTCCAGCGCACCCAGAAGATAGAGTATCCCCTGTGCAAGAAGCTGTATTTCGTGTGCAAACTAGAATAGCCAAGCCTATGCCTGATGCCAAAGAACATACAATGTTAGCAAGGTTTCTTGTTTCTTCCAATCAAATAGGTTGTCTCCTTGGCAAGGGTGGTTCCATCATAACTGAAATGAGGAAGAAATCAGGGGCCCATATCCGTATATTAGGAAAGGATAAGGTTCCAAAGTGTGCTTCAGAAGATGAAGAAGTAATTCAGGTAAACGGAGAAATTGAGGCAGTGCATGATGCTCTTATGCAAATAACTACTAGATTAAAGCATCATTTCTTCCGTGATTCACATCCATCTGTCAATTATCCTTCAAATTCTCCATTTGTGGATCAACTTCCTCCATTCCCACCTTATTTAGGAAGACGGGGACTGTCACCTCCTGGGATGTATTCTGACCTTGGTCCTCCACCTTATGCGGGTTTTCCTCATGATGACCGTCCTCCATTTTTGAATAACATACACAGACCAGGCATTCCTCCTCACATATCTGAAAGGAAGCATTGGGGTCCTCAGGGGGTACTTGAAGGTGGCTCACGCATTGGCTTGCCAGACTTTCCAGGAGGTCCTCCTAGAAGAATTTCAGGATTTGCAGGGGGTAGCCAACCAATTATCACAAGTACCACTGTTGAAGTTGTTGTTCCTCGAGCACTGGTGCCTGTAATATATGGGGAAGATGGTGAATGCCTGAAACAAATACTTCAGATCTCTGATGCAAATATTACTATAACTGATCCAAAACCCGGAGCTGTGGAAACTAAAATTATAATATCTGGAACCCCTGAGCAAACTCATGCAGCCCAAAGTCTTATTCAGGCATTTGTCATGAGTGAGAGGGAGTCTGGTTGA 2025 0.4356 MASSKRPNVEPNGKGKRQKSSGGFSSLDVSPGTAVFRLLCPVSRIGSVIGKGGAIISQIRQESGVKVKIEEAIPGCDERVITISGSDKEAEEVHAEQVREVNNDNAGIEGKGDEEERDGGDGAGDDNEEKEDKSSVLVEDSPSEKGNSAIRKAISLVFERMVEGVEEMSEGDEESNKSSTLVFRLLILTTQVGCLLGKGGSVIKRMAAESGAHIRILPKVKLPACASASDEIVQISGGVDVVRKALQSVSHQLLENPPRDHELSANFNGSSHSSGQFAPHSRSFGGQPFGAAHDISIFHSGPPLMSKFHEAAIHGRTRPMQEMLTFRLLCPVERAGNVIGKGGTIIKTLQQETVSDIKIVESPPDSEDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAKPMPDAKEHTMLARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALMQITTRLKHHFFRDSHPSVNYPSNSPFVDQLPPFPPYLGRRGLSPPGMYSDLGPPPYAGFPHDDRPPFLNNIHRPGIPPHISERKHWGPQGVLEGGSRIGLPDFPGGPPRRISGFAGGSQPIITSTTVEVVVPRALVPVIYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSERESG 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01767 674 CDD KH-I_PEPPER_rpt2_like 182 250 - -
Vian4g01767 674 ProSiteProfiles Type-1 KH domain profile. 180 249 - -
Vian4g01767 674 MobiDBLite consensus disorder prediction 263 280 - -
Vian4g01767 674 ProSiteProfiles Type-1 KH domain profile. 323 390 - -
Vian4g01767 674 MobiDBLite consensus disorder prediction 14 28 - -
Vian4g01767 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 323 407 IPR036612 GO:0003723
Vian4g01767 674 ProSiteProfiles Type-1 KH domain profile. 33 98 - -
Vian4g01767 674 Pfam KH domain 184 249 IPR004088 GO:0003723
Vian4g01767 674 Pfam KH domain 325 377 IPR004088 GO:0003723
Vian4g01767 674 Pfam KH domain 412 477 IPR004088 GO:0003723
Vian4g01767 674 Pfam KH domain 601 664 IPR004088 GO:0003723
Vian4g01767 674 Pfam KH domain 36 92 IPR004088 GO:0003723
Vian4g01767 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 169 260 IPR036612 GO:0003723
Vian4g01767 674 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 320 663 - -
Vian4g01767 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 404 486 IPR036612 GO:0003723
Vian4g01767 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 599 668 IPR036612 GO:0003723
Vian4g01767 674 CDD KH-I_PEPPER_rpt1_like 33 97 - -
Vian4g01767 674 MobiDBLite consensus disorder prediction 1 28 - -
Vian4g01767 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 29 90 IPR036612 GO:0003723
Vian4g01767 674 Gene3D K Homology domain, type 1 32 104 IPR036612 GO:0003723
Vian4g01767 674 Gene3D K Homology domain, type 1 406 484 IPR036612 GO:0003723
Vian4g01767 674 Gene3D K Homology domain, type 1 177 257 IPR036612 GO:0003723
Vian4g01767 674 Gene3D K Homology domain, type 1 598 671 IPR036612 GO:0003723
Vian4g01767 674 Gene3D K Homology domain, type 1 322 400 IPR036612 GO:0003723
Vian4g01767 674 CDD KH-I_PEPPER_rpt1_like 324 391 - -
Vian4g01767 674 MobiDBLite consensus disorder prediction 85 99 - -
Vian4g01767 674 MobiDBLite consensus disorder prediction 255 280 - -
Vian4g01767 674 CDD KH-I_PEPPER_rpt2_like 410 481 - -
Vian4g01767 674 ProSiteProfiles Type-1 KH domain profile. 599 663 - -
Vian4g01767 674 MobiDBLite consensus disorder prediction 106 139 - -
Vian4g01767 674 MobiDBLite consensus disorder prediction 85 147 - -
Vian4g01767 674 ProSiteProfiles Type-1 KH domain profile. 408 477 - -
Vian4g01767 674 SMART kh_6 322 398 IPR004087 GO:0003676
Vian4g01767 674 SMART kh_6 179 254 IPR004087 GO:0003676
Vian4g01767 674 SMART kh_6 32 102 IPR004087 GO:0003676
Vian4g01767 674 SMART kh_6 598 668 IPR004087 GO:0003676
Vian4g01767 674 SMART kh_6 407 482 IPR004087 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01767 Vian-Chr4 33937499 33941623 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01767 K21444 - gmx:100777433 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01767 4 33937499 33941623 Vian4g01767 4 33937499 33941623 ECH