Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01766 ATGTGTGTCATCTTGCCATTTATCATCTTAATCCAAACTCTTATAAGTACTCCCAAACCAAACCAACCACACCAACCATCAGCACAGAAAAACAAACAAACACACCCTCTTTCTCTTTTTCCCTTTTCCTTGCTCTCACTCCGAAACATGAATCTTGATCAGTTTCAGAAAAACAGCATGTACGTGGAAACCCCAGAAGCTTTTGGTGAAGGTGACAAAAACTTCGACGATGATGGACGTGACAAGAGAACTGGAACATGGATAACTGCGAGTGCTCATATCATAACCGCAGTGATAGGATCTGGAGTGTTGTCGCTTGCATGGGCGATTGCACAGTTGGGTTGGGTGGCTGGCCCTGCGGTTCTCCTCGCCTTCTCTTTCATCACATACTTCACATCAACTCTTCTGGCAGACTGTTATCGTACACCTGACCCTGTTCATGGCAAGAGAAACTACACCTATTCTGACGTTGTGAAATCCGTCTTAGGTGGGAGGAAATTCCAACTGTGTGGATTAGCTCAGTATATAAATCTGGTCGGTGTAACTATCGGATACACAATAACGGCATCAATCAGTATGGTGGCGGTGAAAAGGTCAAACTGTTTTCACAAACATGGACACCATGAGAAGTGCTTCACGTCAAACAACCCTTTCATGATTATCTTTGCGTGCATCCAAATCGTGCTTAGTCAGATACCGAATTTCAGCAAGCTCTGGTGGCTGTCTATTGTTGCAGCAGTCATGTCTTTTGCTTATTCTTCCATTGGACTCGGCCTCTCTGTTGCCAAAGTTGCAGGTGGCGGAGATCATGTACGGACAACCTTAACTGGGGTGCAAGTTGGTGTGGATGTTACAGGATCTGAGAAGGTCTGGAGGACCTTTCAAGCTATTGGTGACATTGCCTTTGCTTACGCTTATTCTAACGTTCTCATTGAGATACAGGATACCCTGAAATCGAGCCCTCCAGAGAACAAGGTCATGAAAAGATCAAGTTTGATTGGCATCATGACAACAACCTTGTTTTATGTACTATGTGGCTGCTTAGGTTATGCAGCATTTGGAAACGAAGCACCAGGAAATTTCCTCACCGGGTTCGGCTTCTACGAGCCCTTTTGGCTCATAGACTTTGCTAACATCTGCATAGCCGTGCACTTGGTTGGAGCATATCAGGTTTTCTGTCAGCCAATATTTGGATTCGTAGAGAACTGGAGTAAGGAAAGGTGGCCCAACAGCCAATTTGTTAATGGGGAGCATACAGTGAAGTTCCCATTGTGTGGAAGCTACAGTGTGAACTTTTTCAGGGTGGTGTGGAGAACGACATATGTTATCATCACTGCTGTCTTGGCTATGATGTTTCCATTCTTCAATGACTTCCTAGGACTGATTGGTTCGGTGTCCTTCTGGCCATTGACCGTTTACTTCCCCATAGAGATGTACATTAAGCAGTCCAAGATGAAAAAGTTTTCCTTCACATGGACATGGCTCAAGATATTGAGCTGGGTTTGCTTGATTGTTTCCATTATTTCAGCTGCTGGCTCCATTCAAGGCCTCGCTCAAGATCTCAAGAAATATCAGCCCTTTAAAGCCCACCAATAG 1596 0.4467 MCVILPFIILIQTLISTPKPNQPHQPSAQKNKQTHPLSLFPFSLLSLRNMNLDQFQKNSMYVETPEAFGEGDKNFDDDGRDKRTGTWITASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLLAFSFITYFTSTLLADCYRTPDPVHGKRNYTYSDVVKSVLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHHEKCFTSNNPFMIIFACIQIVLSQIPNFSKLWWLSIVAAVMSFAYSSIGLGLSVAKVAGGGDHVRTTLTGVQVGVDVTGSEKVWRTFQAIGDIAFAYAYSNVLIEIQDTLKSSPPENKVMKRSSLIGIMTTTLFYVLCGCLGYAAFGNEAPGNFLTGFGFYEPFWLIDFANICIAVHLVGAYQVFCQPIFGFVENWSKERWPNSQFVNGEHTVKFPLCGSYSVNFFRVVWRTTYVIITAVLAMMFPFFNDFLGLIGSVSFWPLTVYFPIEMYIKQSKMKKFSFTWTWLKILSWVCLIVSIISAAGSIQGLAQDLKKYQPFKAHQ 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01766 531 Pfam Transmembrane amino acid transporter protein 83 517 IPR013057 -
Vian4g01766 531 FunFam Amino acid permease 6 80 521 - -
Vian4g01766 531 PANTHER OS05G0424000 PROTEIN-RELATED 81 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01766 Vian-Chr4 33929123 33932969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01766 56 529 Organic Solute Cotransporters AT5G49630 77.197 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01766 K24917 - gmx:100806335 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01766 4 33929123 33932969 Vian4g01766 4 33929123 33932969 ECH