Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01756 ATGGCCTCGTTTCGGCGGACACTGTCGCCGGCGTATCCCGATCGCCAGTACCTAAACGGTTCGTTTCCGGTTTCCTCTCCAACGCATAAGCTCGCTTCCGGGAACGCCAAGTACTCGTCGCCGTTACCGGCTCTTGCGGCGGCGTTTCGGCGACTCGTCGGCGGTGTTTTCACGCGCCGGCACGGTCGGAAAGGGCAGTGGAGACGAGCGGCGTTCAGGTGCGTTCTGTGTTTCTTCGTAGGGTTCTTGCTAGGCATGTTTCCCTTCGGCCACATGGCGGAGGACATTCGGTCGCACGAAATCTCGTTCGAGATGAAGCCGCCGCTGCCGCATTCGAACAACGCGCAGCAGCTTCTCCAGGAAGATCGCGTTCTGCGGAATCGCGTCGATGAGGGTTTCGTGATCGATCCGGTGAGCCTAAGCGCGGAGAGGGAGAGGCAGGGTGATGGGTTCGATCTTGTGCCGAGGAAGCCGCTGATTGTGGTGACGCCGACGTACGGCCGAGCTTTTCAGGCGTATTTCCTGAACCGGTTGGGGCAGGTGTTGCGGCTGGTGCCGCCGCCGGTGGTGTGGATTGTGGTGGAGATGAAGGCGGCGTCGATGGAGACGGCGGAGGTACTGAGGAAGACGGGAGTGATGTATAGGCATTTGGTGTGCAATAAGAATTTGACGGATGTGAAGGACAGGGGGGTTCATCAGAGGAACACAGCGTTGGAACACATTGAGCGTCATAGGCTCGATGGGATTGTTTACTTTGCGGACGATGATAATGTGTATTCTCTTGAGTTGTTTGACTCCTTGAGAGACATCAGCCGCTTTGGCACTTGGCCTGTTGCCATGCTTGCGCCAAGCAAGAACAAGGCCATTTTGGAGGGTCCTGTATGCAATGCAAGCCAAGTGATCGGATGGCATACAAATGAGAAAAGTAAAAGACTTCGTAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCACAATCTTGTGGGATCCAAAACGATGGAGGCGCCCTTCTTTAAATCCCATTAGACAGTTAGACACAGTGAAGGAAGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAAAGTCAAATGGAAGGCTCACCTCATGGCTGTTCCAAAATAATGAATTGGCATCTTCATTTAAGTGCTCATAATACAGTTTACCCAAAAGCTTGGGTGCTTCAGAAAAACCTAGATGCTATCATACCTGTCAAGTAA 1233 0.5239 MASFRRTLSPAYPDRQYLNGSFPVSSPTHKLASGNAKYSSPLPALAAAFRRLVGGVFTRRHGRKGQWRRAAFRCVLCFFVGFLLGMFPFGHMAEDIRSHEISFEMKPPLPHSNNAQQLLQEDRVLRNRVDEGFVIDPVSLSAERERQGDGFDLVPRKPLIVVTPTYGRAFQAYFLNRLGQVLRLVPPPVVWIVVEMKAASMETAEVLRKTGVMYRHLVCNKNLTDVKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLELFDSLRDISRFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPSLNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPHGCSKIMNWHLHLSAHNTVYPKAWVLQKNLDAIIPVK 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01756 410 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 66 404 IPR005027 GO:0015018|GO:0016020
Vian4g01756 410 SUPERFAMILY Nucleotide-diphospho-sugar transferases 158 403 IPR029044 -
Vian4g01756 410 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 158 405 IPR029044 -
Vian4g01756 410 Pfam Glycosyltransferase family 43 178 386 IPR005027 GO:0015018|GO:0016020
Vian4g01756 410 CDD GlcAT-I 157 388 IPR005027 GO:0015018|GO:0016020
Vian4g01756 410 FunFam Glycosyltransferases 158 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01756 Vian-Chr4 33752059 33755338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01756 1 410 Glycosyltransferase AT1G27600 61.707 4.40e-180 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01756 K20869 - gmx:100809892 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01756 4 33752059 33755338 Vian4g01756 4 33752059 33755338 ECH