Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01755 ATGGCCGCTCCTACCAAGGACCAAGCCCTCTCTCTTCTCGCTACGGCCAACAACCACGGCGACCTTGCCGTTAAAACCTCGTCGCTCAAACAAGCAAAGGACCTTCTTCTCTCCATCGACCCCTCTCTCGCCGCCGACCTCTTCCCTTACTTGCTTGGGCTTCAGTCTTCTCCCGAAAGCCTCGTTCGCAAATTGCTCATTCAGATAATCGAGGAGATTGGTTTTAGAGCAGTTGAGCACTCTCCTACGCTGATATCTGTACTATTAACATTTTTACGAGACAGTGATGTAATTGTTGTAAAGCAGTCTATTGTTAGTGGCACAAATATCTTTGGTAGTGTTTTTGAGGAGTTGATTGTGCAGTTTCAACAAAATGGTAAAGTTGAGAGGTGGCTAGAAGATACTTGGATCTCAATGCTTAAGTTTAAGGATGCTGTTTTTGGGATTGCTGTGGAGCCTGGTTCTGTTGGAATAAAGTTGCTGGCACTGAAATTCCTTGAAATGTTTGTATTACTATTTGCATCTGACATCAGTGATTCTGAGAAATTAGCCACAAAAGGAGGTAGACAAGCTTTTAATGTGTTGTGGTTGGTTGGTGGTCATCCTCACCCTGTTCTTGATCCAGTGGTGCTCATGTCAGAAGGAAATAGGACTCTTGGCATTCTATTAAATTTATTGCAGTCTGTTGGCACTCTTCCTGGTTGCTTGACTATTACTGTTGTAAATTGTTTAGCAGCCATTGCAAGAAAAAGGCCACAGCACTATGATACTATTCTTTTAGCATTGCATGAATTTGATCCAAATGTTCAAACAGCGAAGGGATGTCACGTTGCTAGTATTCAGTACTCCTTAAGAACAGCTTTTCTGGGATTTCTTAGGTGCACTTATTCACCAATACTAGAGTCAAGAGAAAGACTAACAAGGAGCCTGCGAGCTATGAATGCAGGGGATGCTGCAGATCAGGTGCTTAGGCAAGTTGACAAAATGATTAAAAATGGTGATCGTCCTACTCGTGATGCACGAGTTAACAAGGATGAACAACCATCAATTCAGTCATCTGTTTCAGGGGAATTATCTAGAAAAAGACCTGTTCCTCTAGATAATGAACAAATGACCAATGGTCATGAAACCATATCTAAACGGATTCGTTCTGGTGCTGACTCTCAGTCTACTTTACCAGCTAAAATAAATGATCCTGGACAAGATCCTAACTCTGTTAATGGAGTATCACCTAATGTTCCTTTGCTAGATAGTGAAATGACTGCTGTAGAGCAAATGATTGCTATAATTGGTGCTTTACTTGCTGAAGGAGAGAGAGGTGCCGAATCTCTTGAGATCCTCATTTCAAAGATTCATCCTGATCTACTGGCTGATATTGTCATAACTAATATGAAGCATTTGCCTAAGACTCCCCCACCACTGTCAAGGATTGGGAATTTACCAGCAACACGACAATTAAACTCCCAAGTCAGTCAATCACATGTTATAGCAACTTCTGTTCCAATAAATTCTGTCCAATCCGTGTCTGGTACTGGCCAAGCTGTGTTGCCTTCAACTACGGCCACTGTTATTGGCACTAGTTCATTGCCGTCTGACACTTCTATCTTCAGTAACCTGCCTGCTGATTCTAAACGTGATCCTCGGCGGGATCCCCGTCGCCTTGATCCCCGGCGTGTTGTGGTAGCTCCTGGAGGAGCAACTGTATCAGTTACAGATGATAATGGGGCCACAAAAATTGAGTTTGATGAACCTGTTTCTTCAATTAAACCTGTTTCACTTCCTGTCGTTACTGCTGATGACAATACTCCATCAGATTTAACAGTCAAAATAAAAAATGATGATATGATCTCTAAAGGTGCAGCTGATCAGGTAACTCCTAAAACAGAGGTTCAGGAAAGGCCTGGAGATATTCATCAGATTGCAGAAGCAGATACTTCCTTTGGTCCTTCAGTCTCATCCACTGATTTAAGAGAGGAGGATCCGAGTTCAGTGAATATGTCAGATGAAATTGAAGCAATTGGTACAGATTCATCATCTATTTCAGAGTTTGATCAGTTTTCTCTTGATGTTCAAGTTGAACCCACATTGGAAGATACCTGTCTGGAGTTACCACAGCTTCCACCTTATGTTGAACTATCCAAAGAACAGCGACGTATAGTGAAAAACATGGCTGTTAGGCACATAATCAATTCATACAAACATTTACATGGAACATATTGTCAGCAGTTTTGGATGCCACTACTTGCTCGACTAGTTGCTCAGATTGACGATGACGAAGAGTTTATTATGATGCTGCAAAAACACATCTTGGAAGACCACTGGATAAAGGGACATGAACTTGTACTGCATGTTTTGTACCATCTGCACTCCCTGATGATATTCGATTCAGTTGAAAATGCTTCATCTTCTGCTGTTTTATATGAAAAATTTCTCTTGGGAGTGGCCAAAACTTTATTGGACTCTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTTGGTGAAGTTCCACTTTTGCCTGAGTCGTCCTTGAAGATTTTGAATGATCTCTGCTATTCTGATGTTATTGGTCATGATGGAAAAGTTATCCGTGACATTGAACGTGTGACTCAAGGCCTTGGTGCTATCTGGAGTTTAATTTTGGGGTGTCCACAAAATCGCCAAGCCTGCTTGGGAATAGCATTGAAGTGTGCTGTCCACCCACAGGATGAGATTCGAGCTAAAGCTATTCGGCTGGTTACAAACAAGCTCTTTCAGCTTAGTTACATATCAGGAGATGTTGAAAAGTTTGCAACAAAGATGCTGCTTTCTGCTGTAGAACATGAAGTTTCAGATACGGGTCTTTTGCAACCTGGACCTGGACCTACTGAACATAGAGCTGAGGCAGAGGTTGAAGGCCCTGAAATAAGTACTTCCGAGGTTTCAGAGTCTACAATTTCTGAAGATGAATCTGCTAGAAGGGCTAAACCATTGATTCAAAATGTTCCATCTATATCATTTTCTGAAGCTCAACGTCTCATTTCTTTGTTTTTTGCCTTATGTACTAAGAAACCCGGTCTTCTTCAGATTGTATTTAATGTGTACGGGCAAGCCCCGAAAATTGTTAAACAGGCTTTTCATCGCCACATTCCTATTGTTGTCAGGGCACTTGGGCAATCTTATTCTGAACTGCTCCGTATCATATCTGATCCACCTCAAGGAAGTGAAAATCTTCTGACACTGGTACTGCAAATATTGACTCAGGACACGTCGCCATCTTCTGATTTAATATCTACGGTTAAACGTTTGTATGAAACAAAATTTAGAGATGTTACAATTCTTGTTCCATTATTGTCTTCGCTTTCCAAACAGGAGGTTTTACCAATATTCCCAAGGCTTGTTGGTCTTCCATTGGAAAAGTTTCAAAGAGCACTTGCTCACATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACTCCTGTAGAAGTGTTGGTTGCAATGCATGGAATTGTTCCGGAGAAGGATGGCCTTGCACTTAAGAAGATAACAGATGCTTGCTCGGCTTGTTTTGAGCAACGTACTGTGTTCACACAACAGGTTCTAGCAAAGGCATTGAACCAAATGGTTGATCAAACTCCTCTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAATTGATGCTTTTCCTGCACTGGTTGATTTTGTTATGGAGATACTCTCAAAACTTGTGACAAGACAGGTGTGGCGTATGCCTAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACACAGCCACGTTCTTTTCATGTTCTATTGCAGTTGCCACCTCAACAACTTGAAAGTGCACTCAACAGGCATGCTAATCTCAGAGGTCCCCTTGCTTCATATGCCAGTCAACCAACTATAAAATCAACACTTAGTAGATCAATTTTAGCAGTTCTTGGTCTTGCAAATGAAACTCATGTGCAGCAAAATTTGTCAACTTCGTTGCACCCTTCTGACACAAGTTCATCAGTTCATGGAGCAACACTTACGTGA 4026 0.4158 MAAPTKDQALSLLATANNHGDLAVKTSSLKQAKDLLLSIDPSLAADLFPYLLGLQSSPESLVRKLLIQIIEEIGFRAVEHSPTLISVLLTFLRDSDVIVVKQSIVSGTNIFGSVFEELIVQFQQNGKVERWLEDTWISMLKFKDAVFGIAVEPGSVGIKLLALKFLEMFVLLFASDISDSEKLATKGGRQAFNVLWLVGGHPHPVLDPVVLMSEGNRTLGILLNLLQSVGTLPGCLTITVVNCLAAIARKRPQHYDTILLALHEFDPNVQTAKGCHVASIQYSLRTAFLGFLRCTYSPILESRERLTRSLRAMNAGDAADQVLRQVDKMIKNGDRPTRDARVNKDEQPSIQSSVSGELSRKRPVPLDNEQMTNGHETISKRIRSGADSQSTLPAKINDPGQDPNSVNGVSPNVPLLDSEMTAVEQMIAIIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPPLSRIGNLPATRQLNSQVSQSHVIATSVPINSVQSVSGTGQAVLPSTTATVIGTSSLPSDTSIFSNLPADSKRDPRRDPRRLDPRRVVVAPGGATVSVTDDNGATKIEFDEPVSSIKPVSLPVVTADDNTPSDLTVKIKNDDMISKGAADQVTPKTEVQERPGDIHQIAEADTSFGPSVSSTDLREEDPSSVNMSDEIEAIGTDSSSISEFDQFSLDVQVEPTLEDTCLELPQLPPYVELSKEQRRIVKNMAVRHIINSYKHLHGTYCQQFWMPLLARLVAQIDDDEEFIMMLQKHILEDHWIKGHELVLHVLYHLHSLMIFDSVENASSSAVLYEKFLLGVAKTLLDSFPASDKSFSRLLGEVPLLPESSLKILNDLCYSDVIGHDGKVIRDIERVTQGLGAIWSLILGCPQNRQACLGIALKCAVHPQDEIRAKAIRLVTNKLFQLSYISGDVEKFATKMLLSAVEHEVSDTGLLQPGPGPTEHRAEAEVEGPEISTSEVSESTISEDESARRAKPLIQNVPSISFSEAQRLISLFFALCTKKPGLLQIVFNVYGQAPKIVKQAFHRHIPIVVRALGQSYSELLRIISDPPQGSENLLTLVLQILTQDTSPSSDLISTVKRLYETKFRDVTILVPLLSSLSKQEVLPIFPRLVGLPLEKFQRALAHILQGSAHTGPALTPVEVLVAMHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPALVDFVMEILSKLVTRQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNRHANLRGPLASYASQPTIKSTLSRSILAVLGLANETHVQQNLSTSLHPSDTSSSVHGATLT 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01755 1341 Pfam Symplekin/PTA1 N-terminal 96 320 IPR032460 -
Vian4g01755 1341 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1340 - -
Vian4g01755 1341 SUPERFAMILY ARM repeat 7 1236 IPR016024 -
Vian4g01755 1341 MobiDBLite consensus disorder prediction 534 555 - -
Vian4g01755 1341 MobiDBLite consensus disorder prediction 383 409 - -
Vian4g01755 1341 Gene3D - 1 346 IPR011989 -
Vian4g01755 1341 MobiDBLite consensus disorder prediction 946 986 - -
Vian4g01755 1341 Pfam Symplekin tight junction protein C terminal 1103 1281 IPR022075 -
Vian4g01755 1341 MobiDBLite consensus disorder prediction 330 345 - -
Vian4g01755 1341 MobiDBLite consensus disorder prediction 330 409 - -
Vian4g01755 1341 MobiDBLite consensus disorder prediction 1321 1341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01755 Vian-Chr4 33720786 33748456 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01755 K06100 - gmx:100789876 2192.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01755 4 33720786 33748456 Vian4g01755 4 33720786 33748456 ECH