Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01744 ATGCTCCCTGCCCTTCTTCTGCCTCGCGACGGGGGAGAACGGCGCGACAAAGTGAAAGGTGTAGAGGTAGGGGATGGTTATTTCTGGGATGTTGACGAATGTCACATTGCTCCAGTTCCCGGTGGACAAGTACGAAATTGTGTCATTAAAGACGAGCTCAAACTGGCCGTAGAAGCGACTCAGAGGGCGGCGCGTGAGTTTATCAGTATGGCCACCGTGGAGATAGAACGCGAGCGGGCGGAGAGTCCGAAAGAAGCAAAAGGCGACGATGACGTTTCGCCGATAGAGGAGGTTCGGATGGTTGTGTCGAACGAAGACAATCCGAACGAGCCGGTCTGGACGTTCCGCATGTGGTTCCTGGGGATCATGGCGGTGGTGTTGCTCTCGTTCCTGAACACATTTTTCGGTTACCGTAGCCAGCCGCTGACGGTGACGATGATATCGGTTCAGGTGGCGACGCTTCCCATCGGGCGCTTCATGGCGAAGGTTCTCCCGAGAAGGAAGGTTCGGATAAGAGGGAGAGAATTTTCACTGAATCCTGGCCCCTTCAACAGAAAGGAGCACGTGCTGATATCCATATTCGCGAATGCGGGTGCCGCTTTTGGAAGCGGTTCTGCTTATGCTGTTGGCATTGTGGATATAATACGCGCGTTTTATGGGAGGAAGATTACCTTCTTGGCTAGCTGGCTCCTGGTCTTGACCACACAGGTGTTAGGGTATGGATGGGCGGGGATAATGAAGAAGTACGTGGTGGAGCCCGCACAGATGTGGTGGCCCGGTACTCTGGTCCAAGTCTCTCTCTTCAGAGCTTTGCATGAGAAAGAAGGGAAGCGCATGTCAAAAGAGAAATTTTTTATCATCGCACTTACTTGCAGCTTCGCGTGGTACGTGGTCCCTGGCTACCTATTTCCGACGTTGTCGATTATTTCGTGGGTGTGCTGGATATTTCCACACTCAGTTACTGCTCATCAACTTGGGTCCGGCAAGAATGGACTTGGTTTGGGTTCTTTTTCTCTTGACTGGACCACCATTGCTTCATTCCTTGGCAATCCCCTTGTCACTCCTTTCTTTGCAATAGCAAACGTCTTAGCGGGTTACATTTTATTCATCTACCTCATCATACCCATTGCATATTGGGGACTTAATCTTTACAGTGCCAACAACTTTCCCATATACTCTTCTAATCTATTCACTTCCCATGGAGACGATTATAATGTTACGGTCATTGTCAATCAAAAGTTTGAGATAGACATGCAAGCATACCAGAAACAAGGTCTAGTCAACTTGAGTGTCTTCTTTGCTGTTAGTTATGGCTTTGGTTTTGCTGCCATTGCCGCATCCCTCACTCATGTTGCCATATTTAACGGAAGGGAGATATATGAACAATTCCGATCTTCACGATCTGGAAAGGAAGACATTCACACAAGACTGATGAAGAAATACAAGCCAATACCTAATTGGTGGTTTCATGTGACGCTTTTAATTTCCTTTGTACTTGCACTTTTACTGTGTACTGTCATGAAAGATCAGGTACAAATGCCATGGTGGGGTCTCATCTTTGCAGCTGGCCTTGCACTTACTTTTACTCTCCCCATTAGCATCATAACGGCCACCACGAATCAGAGTCCAGGATTGAATATCATTACTGAGTACATCATGGGTGTGATCTTACCGGGAGAACCAATAGCAAACGTTTGTTTTAAGACATATGGGTACATAAGTATGTCACAGGCTGTTTCCTTTCTATCTGATTTCAAACTAGGACATTATATGAAGATTCCGCCTCGGTCCATGTTCATCGTTCAGATTATAGGGACTCTGATAGCAGGAACCGTGGATGTTGGTGTGGCTTGGTGGTTGCTAGGTTCAATAAAGAATATATGCAAACAAGATTTACTGCCCGAAAACAGTCCATGGACGTGCCCTGGTGATCATGTTTTCTTTGATGCATCTGTGATCTGGGGTTTGGTTGGTCCAAGGAGGATTTTCGGTACTCTAGGGAAATACCAAAAGCTGAATTGGTTCTTCTTTATAGGAGCAGTGGGACCAGTTGTTATATGGGCACTCCGGAAAGTGTTTCCCAAACAACATTGGATATCCTTAATTCACCTCCCTGTACTTCTTGGAGCAACTGCAAACATGCCACCGGCTAGCACAGTGAACTTCAATTCATGGATTATTGTTGGCACAATCTTTAATTATTTTGTGTTCAAATATAGGAAGAATTGGTGGGAGCGGTATAATTATGTGCTAGCTGCAGCTTTGGATGCCGGATTGGCTTTCATGACAGTTCTTATATACTTTGCAGTTACGATGGAGGGTAAAGGCATTCAATGGTGGGGAACTGATGAGCACTGTCCACTGGCGGAATGTCCAACAGCAAAAGGTCTAATTGCTGAAGGCTGTCCTGTCTTTTGA 2418 0.4648 MLPALLLPRDGGERRDKVKGVEVGDGYFWDVDECHIAPVPGGQVRNCVIKDELKLAVEATQRAAREFISMATVEIERERAESPKEAKGDDDVSPIEEVRMVVSNEDNPNEPVWTFRMWFLGIMAVVLLSFLNTFFGYRSQPLTVTMISVQVATLPIGRFMAKVLPRRKVRIRGREFSLNPGPFNRKEHVLISIFANAGAAFGSGSAYAVGIVDIIRAFYGRKITFLASWLLVLTTQVLGYGWAGIMKKYVVEPAQMWWPGTLVQVSLFRALHEKEGKRMSKEKFFIIALTCSFAWYVVPGYLFPTLSIISWVCWIFPHSVTAHQLGSGKNGLGLGSFSLDWTTIASFLGNPLVTPFFAIANVLAGYILFIYLIIPIAYWGLNLYSANNFPIYSSNLFTSHGDDYNVTVIVNQKFEIDMQAYQKQGLVNLSVFFAVSYGFGFAAIAASLTHVAIFNGREIYEQFRSSRSGKEDIHTRLMKKYKPIPNWWFHVTLLISFVLALLLCTVMKDQVQMPWWGLIFAAGLALTFTLPISIITATTNQSPGLNIITEYIMGVILPGEPIANVCFKTYGYISMSQAVSFLSDFKLGHYMKIPPRSMFIVQIIGTLIAGTVDVGVAWWLLGSIKNICKQDLLPENSPWTCPGDHVFFDASVIWGLVGPRRIFGTLGKYQKLNWFFFIGAVGPVVIWALRKVFPKQHWISLIHLPVLLGATANMPPASTVNFNSWIIVGTIFNYFVFKYRKNWWERYNYVLAAALDAGLAFMTVLIYFAVTMEGKGIQWWGTDEHCPLAECPTAKGLIAEGCPVF 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01744 805 PANTHER ISP4 LIKE PROTEIN 85 804 IPR004648 GO:0055085
Vian4g01744 805 NCBIfam small oligopeptide transporter, OPT family 91 772 IPR004648 GO:0055085
Vian4g01744 805 Pfam OPT oligopeptide transporter protein 113 770 IPR004813 GO:0035673
Vian4g01744 805 NCBIfam OPT family oligopeptide transporter 96 770 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01744 Vian-Chr4 33586727 33593783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01744 70 805 Organic Solute Cotransporters AT1G09930 69.783 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01744 - - gmx:100785973 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01744 4 33586727 33593783 Vian4g01744 4 33586727 33593783 ECH