Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01741 ATGGCAGCGGTGTCCGATCAGACCACTAGTATATGCACTCACTGTGATCGGGCTATCCCTTCTGCAAATATTGATTTGCATTATGCTCATTGCTCTCGGAACCTTGAAAGATGCAAAATTTGTTGCGATATGGTTCCGAAAACGCTTGCCGAGGAGCACTATTTGAACACACATGCCCCGGTTGCCTGTTCGCTGTGCAGTGAAACTATGGAACGTGATATTTTAGATATTCATAGAGATGAAAATTGTCCTAGAAGGATGGTCACCTGTGAGTTCTGTGAGTTTCCCTTGCCAGCCATTGATCTGGTTGAGCATCAGGAAGTATGCGGGAATCGAACAGAACTTTGTCACCTTTGTAACAAGTATGTTAGACTGCGTGAAAGATACAACCATGAAGATAGTTGCAACAGAATTCAAGAGAATTCTTCAAGGCCTTCAAGGTACGTGAGACCAGTTGAAAGAGACGAAGGTCCTCGAAGAAGGCCGCAGAATGATTTCCCAAGAAAGCGTGTTTTTTTCACAATAGCAATCACCGGTATTGCTGTTATTCTCGGGTCTATTTTTTTCCAGAGAAAGACAGATCTCAGCAATTTGCAATAA 600 0.4317 MAAVSDQTTSICTHCDRAIPSANIDLHYAHCSRNLERCKICCDMVPKTLAEEHYLNTHAPVACSLCSETMERDILDIHRDENCPRRMVTCEFCEFPLPAIDLVEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNRIQENSSRPSRYVRPVERDEGPRRRPQNDFPRKRVFFTIAITGIAVILGSIFFQRKTDLSNLQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01741 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 111 IPR013083 -
Vian4g01741 199 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01741 Vian-Chr4 33571097 33576947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01741 - - gmx:100306673 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01741 4 33571097 33576947 Vian4g01741 4 33571097 33576947 ECH