Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01729 ATGGCGACGGAGTTCTGGGCCGTGCGTGGTAAGCATCTTGGATATACTTCTGTGATTTTGGAATCACAGATATGGCCAACACAAATGCAGAATTGTCCCAGGGAAATGGTGGTGCTTCTTATTCTTATTCCCAACCTGGGTCACAAGAGCATCAACAACGTTCTCAAGGTGGCACTGGCAATATGGAGTGATCCAAATGCAATCCCTCAAAAGGGAAATGAAGTTAATTTGACCCTTGGAGGCATTGACCTCAACAATTCAGGCAGTGTTGTTATCAAAGCAGATAAGAAACTTTTGACTGTGCAATTTCCTGATGTTCATGATGGAAGAGCATTCACACTTAAGGCTGAAACCATGGAGGATTTATACGAGTGGAAGACTGCACTTGAGAATGCTTTAGCACTGGCACCTAGTGCTACCAATGGAACGGAGCAAAATGGTATCCCCAGGAACAAACAGACTGATTCAATTGATATTTCTGTGAACCAGTTGAAGGATAGAGAACCAGCTAAATCTACTGTTATTGGTCGACCAATTTTACTTGCTTTGGAGGATGTTGATGGAACGCCATCATTCTTGGAGAAAGCCCTAACATTCATCGAAGAGCATGGAGCAAATGTGGAAGGAATCTTGCGACAAGCAGCTGATGTTGATGAGGTTGAACGTCGAGTTCGGGAATATGAACAAGGAAGAGTTGAATTTTCTCCAGATGAGGATGCACATGTTATTGGAGACTGTATTAAGCATGTACTTCGCGAATTGCCATCTTCTCCAGTCCCCGCATCTTGTTGCAAAGCACTGTTAGAATCTTGTCGAACTGAGCGTGGTAGTAGGGTTGCTGCTATGCGTGAAGCAATAAACGACACTTTCCCAGAACCAAATCGCCGCTTATTGCAAAGAATACTCATGATGATGCAAAGTGTGGCTTCACGCAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCGCCTTTACTTCTTCGACCCCTTTTGGCCGGAGAATGTGAAATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTCTTCAACTTTTACAAGCTGCTGCTGCGGCAAACCATGCTCAAGCAATTTGTATAACCTTATTAGAAGAATATAACAACATATTTGGGGAAGGTTCCATGTCCCCTGACATATACACTGACTCAGATGAAGTGAGTGGATCTGAGAGTGAGGACGAGGCAACTGATGATGAGGTTGAATCGTACAGTGGAACTGAAGATTCAGAGGCCGATTATGAGGAGCATGACCATGCTAGTTCAAGTTCGAAATCCTCAGTTTTGACTGAAAAATCTAAAGCCACTCGAAAGTTATCATCAAAGTCACTAGAAGTCTCACTGCCTGAACAAAAAGATATCAAAAGCTCGGAACATCTCACGAGTCCAAAGAAGACTGACTACGGTGATCAGTCCAATAAGCGTGTTGATAAAGTAGGAAATGCTATTGATGAAGCTGCATTGCAAAATTTAAATTCTCCAGGCCCTGCTATAAAGAAATCCAACACCATGTCCAATGGCCCAGCACCTCGTCATCGCACCACATTGGGGCGCACCTCAGCAAGGAAGAATCTTTCCATGGAATCCATTGATATTTCTATAGAAGACGAGGATGAAATTGAAAGGCTTGAAGCATCCAGGTCAGAATTACAAACTCAAATTGCAGAGCAGGTGAAGGCAAATGCAGAGCTGCAATCTCAAGTGGATAATCAAAAGAAAGCCTTGGACGAGCGTCGTCTTTCTCTTGAGCAGGAAGTTGCTAGACTACATGAACAGTTGAATAAGGAAAAGAATTCTCGGGCAGCTCTCGAGAACAAAGCAGAGCTTGAGGAATTAGCACTGGTAGAAGCAGATCTTGCCAGTTTAGAGTGGAAGGTTGGGGAACTTGTGGCTAGGCTTAATGCACAACTTGAAAGGAATATTGGGACTACTTCAGAGTTCTCGAATCAACCACGACAGATGTCAAATCAGGAAAGAAGATTAAAATACAAGGCAGATGCTGAAGCTGCTGCCTCAACACAATCTGATAGATCAATAAGTAAGGGTACGGTAATGGCCCAACAACAGGACACTCATACTGTCGGAGCAGAAAGTGACACTGAACGAAAGCCAGAGTCAACACCTTTACCAAACAAACACCCACCAAGTAGCTCCAAGCGATCAAGTTCAAAGGGCGAGGGAGGAAATTCCACTCCTTCTGCACTCACAAAACTGACAACCAGACTGAACCTTTTGAAGGTGGCCCGAAATCAGATTGCAAATGAACTCCAAAACTTGGATAAGGGGCGAGACTCAAGTCGCTCGTCACACAATGCGGAAAAAGGAAAAGGGTCTGAGCGTCATCAAACACTTCCATCACCCAAAACATATGGAGGGTCTGAAGCTCACTCTGTGCCAAGCCAAGAAAAAGGTAAGGGGTCAGAATCATCAGACAAAGGATCAAGCAAAGGAAAATTATCCCAACACAGTTCATCAGACAAACTTAAAAAATCAGACAGTCATCCAGCCCACCACACTGATGGATGGAATCAACAAGCAAAACACTTGGAAAGAGGAAGGTCAGATGGCCATCAGACATATAATGTGGACAAAGGCCGGTGA 2628 0.4403 MATEFWAVRGKHLGYTSVILESQIWPTQMQNCPREMVVLLILIPNLGHKSINNVLKVALAIWSDPNAIPQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETMEDLYEWKTALENALALAPSATNGTEQNGIPRNKQTDSIDISVNQLKDREPAKSTVIGRPILLALEDVDGTPSFLEKALTFIEEHGANVEGILRQAADVDEVERRVREYEQGRVEFSPDEDAHVIGDCIKHVLRELPSSPVPASCCKALLESCRTERGSRVAAMREAINDTFPEPNRRLLQRILMMMQSVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSLQLLQAAAAANHAQAICITLLEEYNNIFGEGSMSPDIYTDSDEVSGSESEDEATDDEVESYSGTEDSEADYEEHDHASSSSKSSVLTEKSKATRKLSSKSLEVSLPEQKDIKSSEHLTSPKKTDYGDQSNKRVDKVGNAIDEAALQNLNSPGPAIKKSNTMSNGPAPRHRTTLGRTSARKNLSMESIDISIEDEDEIERLEASRSELQTQIAEQVKANAELQSQVDNQKKALDERRLSLEQEVARLHEQLNKEKNSRAALENKAELEELALVEADLASLEWKVGELVARLNAQLERNIGTTSEFSNQPRQMSNQERRLKYKADAEAAASTQSDRSISKGTVMAQQQDTHTVGAESDTERKPESTPLPNKHPPSSSKRSSSKGEGGNSTPSALTKLTTRLNLLKVARNQIANELQNLDKGRDSSRSSHNAEKGKGSERHQTLPSPKTYGGSEAHSVPSQEKGKGSESSDKGSSKGKLSQHSSSDKLKKSDSHPAHHTDGWNQQAKHLERGRSDGHQTYNVDKGR 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01729 875 MobiDBLite consensus disorder prediction 769 790 - -
Vian4g01729 875 MobiDBLite consensus disorder prediction 384 539 - -
Vian4g01729 875 MobiDBLite consensus disorder prediction 503 536 - -
Vian4g01729 875 MobiDBLite consensus disorder prediction 680 703 - -
Vian4g01729 875 MobiDBLite consensus disorder prediction 765 875 - -
Vian4g01729 875 MobiDBLite consensus disorder prediction 653 744 - -
Vian4g01729 875 SUPERFAMILY PH domain-like 78 136 - -
Vian4g01729 875 Coils Coil 542 622 - -
Vian4g01729 875 MobiDBLite consensus disorder prediction 395 418 - -
Vian4g01729 875 CDD RhoGAP 190 328 - -
Vian4g01729 875 ProSiteProfiles Rho GTPase-activating proteins domain profile. 181 380 IPR000198 GO:0007165
Vian4g01729 875 MobiDBLite consensus disorder prediction 791 813 - -
Vian4g01729 875 MobiDBLite consensus disorder prediction 831 875 - -
Vian4g01729 875 MobiDBLite consensus disorder prediction 721 744 - -
Vian4g01729 875 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 63 780 - -
Vian4g01729 875 SMART RhoGAP_3 187 377 IPR000198 GO:0007165
Vian4g01729 875 Gene3D Rho GTPase activation protein 158 381 IPR008936 -
Vian4g01729 875 SUPERFAMILY GTPase activation domain, GAP 189 382 IPR008936 -
Vian4g01729 875 MobiDBLite consensus disorder prediction 457 490 - -
Vian4g01729 875 Pfam RhoGAP domain 190 333 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01729 Vian-Chr4 33389123 33400597 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01729 - - vra:106760371 1361.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01729 4 33389123 33400597 Vian4g01729 4 33389123 33400597 ECH