Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01704 ATGGAGCATGTGGTGGCCGAAACGCTCAACATCATTCATAATGAAGGAGAGTCATTTTCCCAAAGGGCAGAAATGTACTATAGGAAGAGGCCACAGCTGGTAGGTTATGTAGAAGAAGTCTTTCGAGCATATAGAGCATTGGCACAGAGATATGATCGTATATCAAAGGAACTTCAAAGTGCCAACCGCACCATTGCCACTGTTTTCCCAGAACAAATCCATTATGGAATAGATGAGAATGATGGTGAAGAAAGTTTCCGTGGAACAAAGTCATCATCATCATCATCTCAAAACCCCATCAATCAAACACCAAAAAAGGACATTCCTAAACCTCCATATATACCGAACGATTTTAGAAAACGATGTCCAGTAAGGAGGATTCCTAGCTCTGCAAAATCTCCTCCCATTAGTCCTACTTCAGGTCTGAGTACGGCTGAAGCACTAGAAGAAGTTGACAAGCTTCAGAAAGAAATTTTGGCACTGCAGACTGAGAAAGAATTTGTAAGGAGCTTGTATGAGCATTCCTATGAAAAGTATTGGGAAATTGAAGACAGGATTACAAATATGCAGAGAAGAGTTTGCAATTTTGAAGATGAGTTTGGCATTAATAATATCATAGAAGATAATGATGCACGAGCTTTGATGGAAGCAACTGCTCTAAATTCATGCAAAGAAACCCTGCTTATGTTGCAAGAGGCAATGGCACAATCATCTGAAGAGGCTAAAGAATCGTATCAAATGATTAAGGAAGCTCAAGGCAAGCTTAAAATCCTCAGAGATGGATTTTTTTCTGTAGATAAAAGTGAACTAGACCGAAAAAGCACAGAGGAAGAAGATGTGTTTAGCTTGGAAAAAGAAATGCATGAGTGTGAAATCAGTGAAAAGCTTGAGAAAGATTCAGGTAGTTCCCTCACTTTGGCAGAAATGGCTGACAAGATTGATGACCTTGTAAATAAGGTTGTTACGCTGGAAACTGCAGTCTCTTCTCAGACTGGCTTAGTTAAGAGACTGAGATCAGAAGCAGAAGAACTTAAGAAAATTACACTCGTCTTGGAAGAGGATGAAGAAATGCTGATAGAAGATTCAGAAGAAACCAAAAAGAAGCTGGAAGAAGTTGAAGAAAAGTTGAGGAGAGCTAAAACTCTCAATCAAAGAGTTAAAAGGCGAGGCAACAGCCTCCAAAGACTCTTTACTAGGGCTAATTTTGAGCTTGAATATCTTTCAGGAAAAATAAATAATGTGAAGCCAGATGAGGAGGGAGAGAACTTGGTACTTTACAAAAACAGAAGTGCATCAGATGTAGAACTAAAAGAGGAGCCTGAAAAACTAAGTGATGATAACACAGAAACCAAGAAGGATCTTAAGACTACAAAGGAGAAAAAGGAAGACTACAGTGTGAATCTTGGTGATGTTAGAAATGAAGATAACGAGTACAATTGGAATAAATCTATTGATTTAATGATTGAAGACATTCCAGAGTTAATTCCGCTGAATAAGGATGATTTTTCTGGGTCAAAGAGTAATCTTGACACTGAATCACTCGATCAGGTAACTGGTGAGAAGGATCAAACTAAGTGGAGTCAGATATTTGCAAGTGGATTAGAGGACAGAGAAAAGATTCTATCGGAATTCAATTCAGTTTTAAGGAACTACGAGGATGTAAAGGGCAAACTCAATGATGCGGAGAAGAAAAATCAGGACAACATTTTGGAGTTCGCACTTCAGATAAGGGAGTTGAAGGATACTCTTGAAACTAAGGAAAAAGAGATCAACATTTTACAGCAGAAGCTGACCTGCTCTGAAACAAGTCCAGAAGAAAGTCCTCGCATCACTCTCCCAGATTATAACCACACACCACAAGAAGCACTTCTTGGAATTGCACCTCATGAAACAGAGACACAGGACACAGAAAATCCAACTTCAAACACAGGTGCAGGTGCAGGTGCAGGTAGTACTTCTGATGCAGATCACCACCAACAATGTGTTGATAAAAAAACAAAGATTGGCATACTAGTGAAGGTGACATCTAGCCAGCATAACAGGAGCCGTTCACTTTCAATCTTGGAGAAGAAATTTCGTTCAGCCATTAATATATTGCTAGAGGAGAACCTTGAGTTCTGGTTGAGGTTCAGCACTTCAGTGCACCAGACACAGAAGTTCCATGATTCCATAGAGGACTTAAAATGTGAGCTTAGAAGCATAAGGGACGACAATATGTCCCACGAGAACTTAAATATCATGCACTCTGACATAAAAGCAATAATTAAACACCTGAGAGAGATAAGAACTGAGTTATTACTATGGTTGGATCACAATGAGGTTTTGCATGAAGAGTTACAACGTAGGCACCCATCATTGTGCACCTTACAAGATGAAATAGCAAGAGCAGCAAATCCAAATTGTGCATCCAATATGGCAGAACTTAGTGGGTATCAGGCTGCAAAGTTTCAAGGTGAGGTTCTCAACATGAAGCAAGAGAACAAGAAGGTTTGTAGTCAACTGCAAGCAGGTGTCGTTTTTGTGAAGGGATTGAAAGGCCAAGTTGATAAGATGCTACAAGAACTGAGTAAAGAAATAGGGGTTAACAATCAAGACCAAATTACAAAACAATCCACAAGTCGAGCTAGAATACCCTTGAAGTCTTTTCTGTTTGGTGTCAAGTTAAAGAAACAAAGGCAACAAGTCATTGAATGTGAGAGTCCAGCAGGGCAAAGACAATACAGTGATCTAGCAATTGATGATGATGACCTTGACTAG 2757 0.3946 MEHVVAETLNIIHNEGESFSQRAEMYYRKRPQLVGYVEEVFRAYRALAQRYDRISKELQSANRTIATVFPEQIHYGIDENDGEESFRGTKSSSSSSQNPINQTPKKDIPKPPYIPNDFRKRCPVRRIPSSAKSPPISPTSGLSTAEALEEVDKLQKEILALQTEKEFVRSLYEHSYEKYWEIEDRITNMQRRVCNFEDEFGINNIIEDNDARALMEATALNSCKETLLMLQEAMAQSSEEAKESYQMIKEAQGKLKILRDGFFSVDKSELDRKSTEEEDVFSLEKEMHECEISEKLEKDSGSSLTLAEMADKIDDLVNKVVTLETAVSSQTGLVKRLRSEAEELKKITLVLEEDEEMLIEDSEETKKKLEEVEEKLRRAKTLNQRVKRRGNSLQRLFTRANFELEYLSGKINNVKPDEEGENLVLYKNRSASDVELKEEPEKLSDDNTETKKDLKTTKEKKEDYSVNLGDVRNEDNEYNWNKSIDLMIEDIPELIPLNKDDFSGSKSNLDTESLDQVTGEKDQTKWSQIFASGLEDREKILSEFNSVLRNYEDVKGKLNDAEKKNQDNILEFALQIRELKDTLETKEKEINILQQKLTCSETSPEESPRITLPDYNHTPQEALLGIAPHETETQDTENPTSNTGAGAGAGSTSDADHHQQCVDKKTKIGILVKVTSSQHNRSRSLSILEKKFRSAINILLEENLEFWLRFSTSVHQTQKFHDSIEDLKCELRSIRDDNMSHENLNIMHSDIKAIIKHLREIRTELLLWLDHNEVLHEELQRRHPSLCTLQDEIARAANPNCASNMAELSGYQAAKFQGEVLNMKQENKKVCSQLQAGVVFVKGLKGQVDKMLQELSKEIGVNNQDQITKQSTSRARIPLKSFLFGVKLKKQRQQVIECESPAGQRQYSDLAIDDDDLD 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01704 918 Coils Coil 306 326 - -
Vian4g01704 918 Coils Coil 544 564 - -
Vian4g01704 918 MobiDBLite consensus disorder prediction 434 462 - -
Vian4g01704 918 MobiDBLite consensus disorder prediction 631 659 - -
Vian4g01704 918 Coils Coil 144 171 - -
Vian4g01704 918 Coils Coil 724 744 - -
Vian4g01704 918 MobiDBLite consensus disorder prediction 87 104 - -
Vian4g01704 918 Pfam KIP1-like protein 1 52 IPR011684 GO:0003779
Vian4g01704 918 Coils Coil 44 64 - -
Vian4g01704 918 MobiDBLite consensus disorder prediction 77 115 - -
Vian4g01704 918 Coils Coil 569 603 - -
Vian4g01704 918 PANTHER PROTEIN NETWORKED 2D 1 911 - -
Vian4g01704 918 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 58 IPR011684 GO:0003779
Vian4g01704 918 Coils Coil 334 389 - -
Vian4g01704 918 MobiDBLite consensus disorder prediction 631 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01704 Vian-Chr4 33131928 33135673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01704 - - gmx:100805236 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01704 4 33131928 33135673 Vian4g01704 4 33131928 33135673 ECH
Vian7g02083 7 35538293 35541261 Vian4g01704 4 33131928 33135673 PCT